PPT-Sirepo: Providing Simulation Interface and Reproducibility

Chris Hall BLAST Workshop May 7 9 2018 1 Challenges in Computational Science BLAST Workshop May 7 9 2018 2 Code installation and maintenance Different architecturesoperating systems. Thomas Steckler. FORCE2015, Oxford, 12-13 Jan 2015. 2. The Pillars of Good Scientific Practice. Reproducibility. Robustness. Relevance. SCIENCE. 3. Should Scholarly Research Aim . for . Reproducibility or Robustness?. Model Sharing Group Presentation. Interagency Modeling and Analysis Group. Herbert Sauro. Maxwell Neal. University of Washington. Definitions. Repeatability. The ability for. an individual . to show that an experiment, repeated using the same material and equipment, yields the same statistical result.. Back to Basics. Judy Hewitt, Ph.D.. On Detail to OER. October 17, 2015. NIH Regional Seminar. Learning Objectives. Describe . the issue of reproducibility and NIH plans to address it. Summarize . changes to application instructions and review criteria for NIH grants. Corn and Tomato . National Referee. 2014. Melissa Phillips. Monsanto . Seed Technology Center. Waterman, Illinois. Purpose. The purpose of the referee was to introduce Agar (plant culturing media) as a potential candidate for use in germination testing.. Lessons from the . Madagascar Project. Sergey Fomel. Jackson School of Geosciences. The University of Texas at Austin. ICERM Reproducibility . in Computational and Experimental Mathematics. 12/13/2012. Marco . Canini (KAUST) and Jon Crowcroft (. University of Cambridge). What it takes to do reproducible research?. It is actually hard work for both authors and reproducers. Produce solid artifacts. Create, package, share reproducible experiments. Corn Germination. 2016. Melissa Phillips. Monsanto. Seed Technology Center. Waterman, Illinois USA. Purpose. The purpose of the referee was to introduce Agar (plant culturing media) as a potential candidate for use in germination testing for corn.. Justin Y. Shi | . shi@temple.edu. Temple University. reproducibility@XSEDE. | An . XSEDE14 . Workshop | July . 14, . 2014 | Atlanta. , GA. Why . Decoupling. can . I. mprove . P. rogram Reproducibility?. A little history first…. “Why most published findings are false”. Ioannidis, 2005, biostatistician. Clinical trials, epidemiological studies, molecular research. Less likely to be true if. Studies are smaller. back to basics. oct. 27, . 2016. NIH Regional Seminar - Chicago. overview. Why the concern about reproducibility?. The NIH response. Updates to grant applications. Training and Resources. 2. overview. Dr. . Feng Gu. Weather Prediction Example. Possible models to predict the weather tomorrow. . 1. Mystery-based models . (e.g., whenever my right eyelid twitches, it is going to rain tomorrow) . Matthias Flittner. 1. , Robert Bauer. 1. ,. Amr . Rizk. 2. , . Stefan . Geißler. 3. , . Thomas . Zinner. 3. , . Martina . Zitterbart. 1. 1. Karlsruhe Institute . of. Technology, . 2. Technische . Universität Darmstadt, . Record of Decision is the This alternative Resource Management while meeting the National This alternative resources such timber forage devel- and minerals providing for Final Preferred the incorporat PI: Maksim . Rakitin. , . Co-PIs: Mikhail . Fedurin. , Yonghua Du. Brookhaven National Laboratory. LDRD#22-031 PS/EPS (“Received”). January 20, 2022. Experiment Goals at ATF:. Collect e-beam tunning data (PS set/read, BPM read ).