PPT-Ensembles of HMMs and their use in

biomolecular sequence analysis Namphuong Nguyen Carl R Woese Institute for Genomic Biology University of Illinois at UrbanaChampaign Human Microbiome 10 times more bacteria cells than human cells. Old folks allow their bellies to jig gle like slow tambourines The hollers rise up and spill over any way they want When old folks laugh they free the world They turn slowly slyly knowing the best and worst of remembering Saliva glistens in the cor Felzenszwalb Daniel P Huttenlocher Jon M Kleinberg AI Lab MIT Cambridge MA 02139 Computer Science Dept Cornell University Ithaca NY 14853 Abstract In applying Hidden Markov Models to the analysis of massive data streams it is often necessary to us 1. Ensembles. CS 478 - Ensembles. 2. A “Holy Grail” of Machine Learning. Automated. Learner. Just a . Data Set. or. just an. explanation. of the problem. Hypothesis. Input Features. Outputs. CS 478 - Ensembles. Steven Salzberg. CMSC 828H, Univ. of Maryland . Fall 2010. 2. What are HMMs used for?. Real time continuous speech recognition (HMMs are the basis for all the leading products). Eukaryotic and prokaryotic gene finding (HMMs are the basis of GENSCAN, Genie, VEIL, GlimmerHMM, TwinScan, etc.). Latest Results on outlier ensembles available at http://www.charuaggarwal.net/theory.pdf (Clickable Link) tsub-topics(eg.bagging,boosting,etc.)intheensembleanalysisareaareverywellformalized.Thisisrem February 2011. Includes material from:. Dirk . Husmeier. , . Heng. Li. Hidden Markov models in Computational Biology. Overview. First part:. Mathematical context: Bayesian Networks. Markov models. Hidden Markov models. Using PFAM database’s profile HMMs in MATLAB Bioinformatics Toolkit. Presentation by: . Athina. . Ropodi. University of Athens- Information Technology in Medicine and Biology . outline. Introduction. Tagging & Sequence Labeling. Hongning Wang. CS@UVa. What is POS . t. agging. Raw Text. Pierre . Vinken. , 61 years old , will join the board as a nonexecutive director Nov. 29 .. Pierre_. NNP. . February 10, 2010. Hidden Markov models in Computational Biology. Overview. First part:. Mathematical context: Bayesian Networks. Markov models. Hidden Markov models. Second part:. Worked example: the occasionally crooked casino. from Finite Correlation Length . Fernando . G.S.L. . Brand. ão. Microsoft Research. Quantum Spin Systems, Recent Advances, . Cergy. -. Pontoise. , 2015. based on joint work with . Marcus Cramer . University of Ulm. 1. Semi-Supervised Learning. Can we improve the quality of our learning by combining labeled and unlabeled data. Usually a lot more unlabeled data available than labeled. Assume a set . L. of labeled data and . Ludmila. . Kuncheva. School of Computer Science. Bangor University. mas00a@bangor.ac.uk. . Part 2. 1. Combiner. Features. Classifier 2. Classifier 1. Classifier L. …. Data set. A . . Combination level. Sushmita Roy. sroy@biostat.wisc.edu. Computational Network Biology. Biostatistics & Medical Informatics 826. Computer Sciences 838. https://compnetbiocourse.discovery.wisc.edu. Oct . 25. th. , 27. Toby O’Hara, HMMS. Derek Robertson, . TransForm. Toby O’Hara. GM. HMMS. Toby is General Manager of healthcare supply chain provider Healthcare Materials Management Services (HMMS) in London, Ontario. Prior to joining HMMS, Toby held positions at Baxter Corporation and Source Medical (Cardinal Health)..