PPT-Introduction to Markov chains

part 1 1 Haim Kaplan and Uri Zwick Algorithms in Action Tel Aviv University Last updated April 15 2016 Finite Discrete time Markov chain 2 A sequence of random variables   Each . Nimantha . Thushan. Baranasuriya. Girisha. . Durrel. De Silva. Rahul . Singhal. Karthik. . Yadati. Ziling. . Zhou. Outline. Random Walks. Markov Chains. Applications. 2SAT. 3SAT. Card Shuffling. Alan Ritter. Markov Networks. Undirected. graphical models. Cancer. Cough. Asthma. Smoking. Potential functions defined over cliques. Smoking. Cancer. . Ф. (S,C). False. False. 4.5. False. True. Van Gael, et al. ICML 2008. Presented by Daniel Johnson. Introduction. Infinite Hidden Markov Model (. iHMM. ) is . n. onparametric approach to the HMM. New inference algorithm for . iHMM. Comparison with Gibbs sampling algorithm. notes for. CSCI-GA.2590. Prof. Grishman. Markov Model . In principle each decision could depend on all the decisions which came before (the tags on all preceding words in the sentence). But we’ll make life simple by assuming that the decision depends on only the immediately preceding decision. Part 4. The Story so far …. Def:. Markov Chain: collection of states together with a matrix of probabilities called transition matrix (. p. ij. ) where . p. ij. indicates the probability of switching from state S. notes for. CSCI-GA.2590. Prof. Grishman. Markov Model . In principle each decision could depend on all the decisions which came before (the tags on all preceding words in the sentence). But we’ll make life simple by assuming that the decision depends on only the immediately preceding decision. Mark Stamp. 1. HMM. Hidden Markov Models. What is a hidden Markov model (HMM)?. A machine learning technique. A discrete hill climb technique. Where are . HMMs. used?. Speech recognition. Malware detection, IDS, etc., etc.. A Preliminary . Investigation. By Andres Calderon Jaramillo. Mentor - Larry Lucas, Ph.D.. University of Central Oklahoma. Presentation Outline. Project description and literature review.. Musical background.. . and Bayesian Networks. Aron. . Wolinetz. Bayesian or Belief Network. A probabilistic graphical model that represents a set of random variables and their conditional dependencies via a directed acyclic graph (DAG).. Markov Models. A. AAA. : 10%. A. AAC. : 15%. A. AAG. : 40%. A. AAT. : 35%. AAA. AAC. AAG. AAT. ACA. . . .. TTG. TTT. Training. Set. Building the model. How to find foreign genes?. Markov Models. . TO EVALUATE COST-EFFECTIVENESS. OF CERVICAL CANCER TREATMENTS. Un modelo de . Markov. en un árbol de . decisión para . un análisis . del . coste-efectividad . del tratamientos . de cáncer de cuello uterino. (part 2). 1. Haim Kaplan and Uri Zwick. Algorithms in Action. Tel Aviv University. Last updated: April . 18. . 2016. Reversible Markov chain. 2. A . distribution . is reversible . for a Markov chain if. . CS6800. Markov Chain :. a process with a finite number of states (or outcomes, or events) in which the probability of being in a particular state at step n + 1 depends only on the state occupied at step n.. BMI/CS 776 . www.biostat.wisc.edu/bmi776/. Spring . 2018. Anthony Gitter. gitter@biostat.wisc.edu. These slides, excluding third-party material, are licensed . under . CC BY-NC 4.0. by Mark . Craven, Colin Dewey, and Anthony Gitter.