PPT-Semantic Similarity over Gene Ontology for

Multilabel Protein Subcellular Localization Shibiao WAN and ManWai MAK The Hong Kong Polytechnic University SunYuan KUNG Princeton University Outline Introduction and Motivation Retrieval of GO Terms. from . GOMMA. Michael . Hartung. , Lars Kolb, . Anika. . Groß. , Erhard Rahm. Database . Research Group. University of . Leipzig. 9th . Intl. . . Conf. . on Data Integration. in . the. Life . Sciences. Ciro . Cattuto. , Dominik Benz, Andreas . Hotho. , . Gerd. . Stumme. Presented by. Smitashree. . Choudhury. Overview. Motivation. Measures of . semantic Relatedness. Semantic . Grounding of measures. １２月７日. 研究会. 祭都援炉. (. マットエンロ. ). Up until now: Getting to know NLP. “Speech and Language Processing” (. Jurafsky. & Martin). 論文：. On-Demand Information Extract . John A. Miller and Alok Dhamanaskar. Collaborators:. Michael E. . Cotterell. , . Chaitanya. . Guttula. , Yung Long Li and . Jessica . C. Kissinger, University of Georgia.. Jie. . Zheng. and Christian J. . and plant phenotypes. George . Gkoutos. Phenotype And Trait Ontology (PATO). The meaningful cross . species and across domain . translation of phenotype is essential .  . phenotype-driven gene function discovery and comparative pathobiology . . Session. Thursday. Sep. 17. Dr. Paola Grosso. Assistant Professor. SNE . group. - UvA. p.grosso@uva.nl. Dr. . Ilya. . Baldin. . Director. , Networking Research . and. . Infrastructure. . RENCI. From Semantic Web Programming by J. . Hebeler. et al., . Semantic Web. Represents data in formats amenable to automated processing, integration, and reasoning. . Data is king and it provides even greater value when connected with other data sources to create a linked data web. . S. imilarity to Semantic Relations. Georgeta. . Bordea. , November 25. Based on a talk by Alessandro . Lenci. . titled “Will DS ever become Semantic?”, Jan 2014. Distributional Semantics . (DS. of Binaries. Yaniv David. , Nimrod . Partush. , . Eran. . Yahav. . @. *. The research leading to these results has received funding . from the . European Union's - Seventh Framework . Programme. (FP7) under grant agreement n° . . . j.pinney@imperial.ac.uk. . Gene annotation. . . G. oal: . . transfer . knowledge . about the function of gene products from model . organisms . to other genomes. . . Gene annotation. Movement led by W3C that promotes common formats for data on the web. Describes things in a way that computer applications can understand it. Describes the relationship between things and properties of things. Lioma. Lecture . 18: Latent Semantic Indexing. 1. Overview. Latent semantic indexing . Dimensionality reduction. LSI in information retrieval. 2. Outline. Latent semantic indexing . Dimensionality reduction. Program for today. :. - . Have. all genes . been. . studied. . with. . the. same . intensity. ?. - . Functional. . annotation. . of. genes/. gene. . products. : Gene . Ontology. (GO. ). - . M. Abdullah. 1. st. . semester . 2018-2019. Computer Science Dept., College of . CS & IT, . Basrah. University. Lecture # . 2. OUTLINE. What’s Ontology?. Ontology in Semantic Web.. Web Ontology Language ..