PPT-Analysis of environmental genomes using Pathway Tools

Steven Hallam University of British Columbia SRI International 2013 Overview Through the looking glass Environmental PathwayGenome Databases MetaPathways Pipeline Development 2 Metabolism. Ann . Lesnefsky. (Stanford University). Sarah Douglas (Harvard University). Julian . Damashek. (Stanford University). Bradley . Tolar. (University of Georgia). Hopkins Microbiology Course 2011. Comparative . Michelle Maloney, Griffith University and AELA. Peter Daniels, Griffith University and ANZSEE. If we woke up tomorrow and every citizen, government and corporation on Earth agreed to live within our ecological limits, how would we do it?. Biostat. & . Bioinfo. short course series. Jianying Li. The Road to Pathway Analysis. Adapted from Werner (2008), Current Opinion in Biotech., 19:50-64. Next Gen RNA-Seq. Acknowledgment. QB for kindly organization. Within . the U.S. Cigarette Manufacturing Industry. TIMOTHY . R. . BELITZ. ADVISOR: DR. . DEBORAH RIGLING-GALLAGHER, . NICHOLAS . SCHOOL OF THE ENVIRONMENT. Objective. Conduct a comprehensive review of environmental performance, sustainability strategies, and practices of US cigarette manufacturers to enable continual improvement. . pathway . knowledgebase. Connecting . pathways, networks, and . disease. Robin Haw, PhD . Project Manager and Outreach Coordinator. Ontario Institute for Cancer Research. robin.haw@oicr.on.ca. San Diego. March 15, 2016. 2014 Workshop. G . × . E ANALYSIS. Diego . Jarquin. Chicago, IL. December 10. Variance components for common . inbreds. and hybrids. Genomes to Fields . Inbred – Pollen DAP. Inbred – Plant height. COST Functional Modeling . Workshop. 22-24 April, Helsinki. Types of data sets and modeling. Commercial array data. – more likely to have . tools that support the use of array IDs.. Custom/USDA array data . www.bioinformatics.ca. 2. Module #: Title of Module. Module . 15. More Depth on Pathway and Network Analysis. Robin Haw. High-Throughput Biology: From Sequence to Networks. March 20-26, 2017. Learning Objectives of Module. Kurt Mullins. Macro- and Micro-Environmental Analysis. Macro-Environmental Analysis. Technological advances. Economic downturn. Political and regulatory. Socio-cultural. Micro-Environmental Analysis. Ann . Lesnefsky. (Stanford University). Sarah Douglas (Harvard University). Julian . Damashek. (Stanford University). Bradley . Tolar. (University of Georgia). Hopkins Microbiology Course 2011. Comparative . Faculty of Science. Lagos State University. . Databases of Insect genomic resources: a review . Abdulazeez. Giwa. 1. *, . Oluwasegun. Gbenle. 2. and . Abiodun. . Denloye. 1. . . 1. Department of Zoology and Environmental Biology, Lagos State University, . Alex Rodriguez * Dinanath Sulakhe Elizabeth Marland arodri7@mcs.anl.gov sulakhe@mcs.anl.gov marland@mcs.anl. Veronika Nefedova Gong Xin Yu Natalia Maltsev * nefedova@mcs.anl.gov gxyu@mcs.anl.g Beyond the Genome 2012. Informatics Workshop, Sep 27, 2012. Josh Stuart, UC Santa . Cruz. “It . is entirely in line with the accidental nature of mutations that . … . the vast . majority [are] . detrimental. Genomic Medicine. Update Session. Provided by Catherine Carpenter-Clawson Programme Manager, WE . GMC with Tracie Miles Genomics Champion RUH, Bath.. Courtesy . of . Genomics England. The Human Genome Project.