Javix Thomas and Yunjie Xu Department of Chemistry University of Alberta Edmonton Alberta Canada T6G 2G2 2 Motivation 1 Xu et al J Chem Phys 1995 103 9541 2 Scharge ID: 627674
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Slide1
ROTATIONAL SPECTRA OF THE TRIFLUORO ETHANOL (TFE) -WATER CLUSTERS AND THE TFE DIMERS
Javix
Thomas and
Yunjie Xu
Department of Chemistry, University of Alberta, Edmonton, Alberta, Canada, T6G 2G2.Slide2
2
Motivation
1. Xu
et al.
J. Chem. Phys., 1995, 103, 9541.2. Scharge et al. Z. Phys. Chem., 2008, 222, 1407.
TFE is an important organic solvent. TFE and water are often used as co-solvents in the studies of protein folding process. The interactions of TFE with itself and with water may play some significant roles molecular recognition of biomolcules. The TFE monomer was extensively studied using rotational spectroscopy1 and the TFE dimer was investigated using low resolution FTIR spectroscopy.2Slide3
Related alcohols
trans
conformation
gauche
conformation
Extra binding site
Ethanol FE
gauche
conformation
TFESlide4
4
4
Conformers of
TFE
dimer with O-H…O H-bond
H-bond donor/acceptor: homo and het 2Insertion into intra-ring: inserted or associated X 2O lone pairs of acceptor:
compact or open X 2 = 8
1.80
2.52
2.52
2.11
2.52
2.52
associated
inserted
1.62
associated
inserted
2.52
2.52
1.91
1.86
2.52
2.52
2.01
homo
heteroSlide5
5
Confs
Δ
Do
kJ/mol
A B CGHzμ
a
,
μ
b
,
μ
c
i
/
hom
0
1.61147 0.43043 0.41144
-2.43
,
-0.1
3,
-1.26
a/
hom
2.82
1.62591 0.39955 0.38001
1.4
3,
2.34
,
-3.3
2
i
/het
0.756
1.51552 0.44402 0.40357
3.12
,
1.13
,
0.25
a/het
3.226
1.83234 0.35243 0.34739
-1.2
8,
0.38
,
-3.8
1
MP2/6-311++g(
d,p
) level of theory
Properties of the f
our
conformers of the TFE dimerSlide6
6
Searches were carried out using a chirp pulsed FTMW spectrometer.
Final measurements were done with a cavity based FTMW spectrometer
0.3%~0.5%
TFE (and water) in Neon or Helium backing gas ( 2~3 atm)
Experimental detailsSlide7
Our chirp pulsed FTMW spectrometer
G
. G. Brown, B. C. Dian, K. O. Douglass, S. M. Geyer, S. T. Shipman and B. H. Pate,
Rev.
Sci. Inst.
, 2008, 79, 053103; S. Dempster, O. Sukhorukov, Q.-Y. Lei, W. Jäger, J. Chem. Phys., 2012, 137, 174303; J. Thomas, J. Yiu, J. Rebling, W. Jäger, Y. Xu, J. Phys. Chem. A., Online, Apr. 25, 2013, DOI: 10.1021/jp402552t.Slide8
Broadband spectrum of
TFE+HeSlide9
Assignment of the TFE dimer Slide10
10
2.82
3.23
0
1.02
ichet
ichom
achom
achet
iohet
iohom
Relative energy
/ kJmol
-1
MP2/
aug
-cc-pVTZ//MP2/6-311++G(
d,p
)
The TFE
dimer versus
the 2-FE
dimer
X. Liu, N. Borho, Y. Xu,
Eur. J.
Chem.
2009
, 15, 270.
0
0.76
ahet
ihom
ahom
ihet
Relative energy
/ kJmol
-1
2.91
2.81
4.52
3.64
MP2/6-311++G(
d,p
)Slide11
6
Conformers of
the TFE-water dimer
Do=0
Do=10.9
Do=21.6
Do=22.3MP2/6-311++G(d,p), ZPE corrected: kJ/mol
2.64
1.87
2.38
2.06
2.55
2.17
2.55
2.55
2.27
1.77
1.70
Do=9.0
Do=16.7Slide12
Broadband spectrum of
TFE+water+He
TFE+water+He
TFE+HeSlide13
Assignment of the TFE-water spectrum
Simulated spectrum of the TFE-waterSlide14
14
Semirigid rotor fits of the most stable TFE-water dimer
Spec. Component 1 Component 12
Const.
A 3.5428110(9) 3.542896(1)
B 1.5504968(2) 1.5504926(2) C 1.3583053(2) 1.3582814(2) DJ 0.1299(2)E-05 0.1298(3)E-05 DJK -0.39(2)E-06 -0.37(2)E-06 DK 0.24(2)E-05 0.24(2)E-05 d1 -0.243(2)E-06 -0.241(2)E-06 d2 0.36(1)E-07 0.36(2)E-07
N 45 45SD 2.3 2.7Slide15
15
Conclusion and future
work
** Only the most stable conformer of the TFE dimer was
identified, in contrast to the related ethanol and 2-
fluoroethanol cases. ** Some unassigned lines may be attributed to the TFE trimer and perhaps even the TFE tetramer.
** Many strong unassigned lines in TFE+water+He are likely due to larger TFE-water clusters. Their assignments are in progress. Slide16
16
Acknowledgement
Funding:
UofA
, NSERC, CFI, AI, Petro-Canada.
Thank you!
Questions?