PPT-Toward Automatically Drawn Metabolic Pathway

Atlas with Peripheral Node Abstraction Algorithm Myungha Jang Arang Rhie and Hyun Seok Park Bioinformatics Laboratory School of Engineering Ewha Womans University Seoul Korea. (a). Revise your knowledge on the properties of enzymes. State what is meant by metabolism and metabolic pathway. State what is meant by an anabolic pathway (and make reference to energy). State what is meant by a biosynthetic reaction. Dr Anissa Atif Mirza. What is Metabolism?. Metabolism is a . network of metabolic /biochemical reactions.. Carried out in living cells.. In a. well organized, integrated and regulated manner.. Related to various biomolecules viz. What you should learn:-. The difference between . Anabolic. and . Catabolic. metabolic pathways, and give examples of each.. The importance of . reversible, irreversible . and . alternative. pathways in the control of metabolism.. Pathway activity levels with ratio. . Abstract. Metabolic pathway activity estimation from RNA-. Seq. data. Yvette . Temate-Tiagueu. , . Qiong. . Cheng, . Meril. . Mathew, I. gor . Mandric. , . Olga . Targeted and purposeful alteration of metabolic pathways found in an organism in order to better understand and use cellular pathways : . - To increase the production rate of the existing products. Targeted and purposeful alteration of metabolic pathways found in an organism in order to better understand and use cellular pathways for the production of valuable products. Practice of optimizing genetic and regulatory processes within cells to increase the cells' production of a substance. . • Be able to describe the various modes of regulation of metabolic pathways as they are presented in this lecture.. • Be able to explain the key properties of coenzymes, and know the types of group carried by each coenzyme discussed in this lecture.. Intermediary Metabolism. OR. Interrelationship Between Various Metabolic . Pathways. OR. Interdependence Of Metabolic Pathways. To Better Understand Metabolism Of Various Biomolecules . Metabolism of each . Bayu. Lestari. What will be Impaired in This Patient?. Obese. Insulin Resistance?. Dyslipidemia? (High TG, High LDL, Low LDL). T2DM?. Metabolic Syndrome. High prevalence of metabolic . s. yndrome: relation between glucose and lipid metabolism. Melnik. & Stephanie . Felten. University of Utah. Isotopic Labeling. References: . http://en.wikipedia.org/wiki/Isotopic_labeling. , . http://en.wikipedia.org/wiki/Crossover_experiment_%. 28chemistry%29. Peter D. Karp . ecocyc.org. SRI International . biocyc.org. . metacyc.org. . BioCyc Overview. Integrates diverse data and knowledge for thousands of genomes. Curated and computationally generated. Steven Hallam | University of British Columbia. SRI International, 2013. Overview. Through the looking glass…. Environmental Pathway/Genome Databases. MetaPathways. Pipeline Development. 2. Metabolism. Microbial Genomes Web Portal. Peter D. Karp . ecocyc.org. SRI International . biocyc.org. . metacyc.org. . SRI International. A nonprofit multi-disciplinary research institute. Metabolic Control Mechanisms . Anadozie, S.O Ph.D.. Metabolic Control Mechanisms . The metabolic pathways are complex and interdependent. With the changing . environments, . the reactions of metabolism must be finely regulated to maintain a constant set of conditions within cells, a condition called homeostasis..