PPT-Running Batch Jobs in R:

How to deal with coarsely parallel problems Wealth from Oceans National research Flagship Malcolm Haddon May 2014 Computer Intensive Many many many iterations Management Strategy Evaluation. It provides Operators the view to e57374ectively control the process Production the information to understand whats happening on the plant 57375oor Recipe authors an environment to easily build and manage recipes Management the information needed to Harvesting unused clock cycles with Condor. . *Advanced Research Computing. The University of Liverpool. Overview. what is Condor ?. High Performance versus High Throughput Computing. Condor fundamentals. I. ntegrated . R. esearch . C. omputing. MATLAB. http://. www.circ.rochester.edu. /wiki/. index.php. /. MatlabWorkshop. Outline. Part I – Interacting with . Matlab. Running . Matlab. interactively. Resources . Basic Usage. After your account is activated:. ssh. . yourid@ssh.fsl.byu.edu. You will be logged in to an interactive node. Jobs that run on the supercomputer are submitted to the batch queuing system. Overview. Many folks running Matlab, R, etc. . Interpreters complicate Condor jobs. Let’s talk about best practices.. What’s . R. ?. #!/. usr. /bin/R. X <- c(5, 7, . 9). cat . (X). What could possibly go wrong. Introduction. This quick guide explains how to install and operate COMSOL Multiphysics . 5.0. on a Linux cluster. It is a complement to the . COMSOL Installation and Operations Guide* . which contains the complete and detailed installation and operations instructions.. Cliff Stein. Columbia University. Modelling. Partly from . Rodero. et. al. . Partly from some . google. experience. M heterogeneous machines (RAM, CPU, disk). N jobs (RAM, CPU, disk, processing time, arrival time). Glidein. A generic approach for the late-binding of jobs to various resource types. High-Throughput . Computing. Focuses on . the throughput over time of many . jobs. Rather than performance . of an . Research Computing Services. Katia Oleinik (koleinik@bu.edu). Shared Computing Cluster. Shared - . transparent multi-user and multi-tasking environment. Computing - . heterogeneous environment:. interactive jobs. Katia Oleinik (koleinik@bu.edu). Shared Computing Cluster. Shared - . transparent multi-user and multi-tasking environment. Computing - . heterogeneous environment:. interactive jobs. single processor and parallel jobs. Resources . Basic Usage. After your account is activated:. ssh. . ssh.fsl.byu.edu. You will be logged in to an interactive node. Jobs that run on the supercomputer are submitted to the batch queuing system. Rob . Lane. HPC Support. Research Computing Services. CUIT. hpc-support@columbia.edu. Topics. Yeti Operations Committee. Introduction to Yeti. Rules of Operation. Yeti Operations Committee. Determines cluster policy. Sri Kumalaningsih. Outline. Overview. Batch fermentation. Fed batch fermentation. Continuous fermentation. Outline. Overview. Batch fermentation. Fed Batch culture. Continuous culture. Growth kinetics. 6. Running the experiment; in the laboratory or online. Running the Experiment in the laboratory. The recruitment of subjects, and booking them into slots.. Greeting the subjects and initiating the experiment..