PPT-Nanopore Sequencing Marcus Stoiber, PhD, LBL EGSB Postdoc

Nanopore Sequencing Outline Nanopore Sequencing Technology Raw Data Transformations and Raw Data Processing Toward Producing a Basecaller Future Directions What is Nanopore Sequencing. Nanopore. Technologies. Nanopore. Sequencing. Introduction to . nanopore. sensing . A . nanopore. : a . nano. -scale hole. . Biological: a pore-forming protein (e.g. . α. -. Hemolysin. ) in a membrane (e.g. lipid . Nanopore. Sequencing of Transmissible . Tetracyline. Plasmids Captured without Cultivation from Stream Sediment Reveals Linked Genes Encoding Resistance to Multiple Human Clinical Antibiotics . J. B. Herrick*, . Craig A. . Praul. Co- Director . Genomics Core Facility. Huck Institutes of the Life Sciences. Penn State University. A very short history of DNA sequencing. I started from the conviction that, if different DNA species exhibited . Dr. Jennifer Weller. May 2016. Sequencing Technologies. 5/20/2016. Dr. Weller B3 Olympic HS. 1. Topics. Fundamentals of ‘Sequencing by Synthesis’. Sequencing Technologies or ‘Platforms’. Sanger/Capillary sequencing. for . Postdoctoral . Scholar Administrators. Alistair Murray, Shannon Monahan & Nancy Child. Alway. . M106. 9:30 am – 11:30 am. Sept 25, 2014. Agenda. Policy/Background. OPA & Department Responsibilities. How we obtain the sequence of nucleotides of a species. …ACGTGACTGAGGACCGTG. CGACTGAGACTGACTGGGT. CTAGCTAGACTACGTTTTA. TATATATATACGTCGTCGT. ACTGATGACTAGATTACAG. ACTGATTTAGATACCTGAC. TGATTTTAAAAAAATATT…. :. Computational Analysis of the Current State, Bottlenecks and Future Directions. Damla Senol. 1. , Jeremie . Kim. 1,3. , . Saugata Ghose. 1. , Can Alkan. 2. and Onur Mutlu. 3,1. 1 . Department of Electrical and Computer Engineering, Carnegie Mellon University, Pittsburgh, PA, USA. Computational Analysis of the Current State, Bottlenecks and Future Directions. Damla Senol Cali. 1. , Jeremie S. Kim. 1,3. , Saugata Ghose. 1. , Can Alkan. 2. and Onur Mutlu. 3,1. Nanopore Sequencing. :. Computational Analysis of the Current State, Bottlenecks and Future Directions. Damla Senol. 1. , Jeremie Kim. 1,3. , Saugata Ghose. 1. , Can Alkan. 2. and Onur . Mutlu. 3,1. Nanopore Sequencing. University of Veterinary Medicine (TiHo) is a position for a The Postdoc will work on a CEPI-funded project, which aims at the development of a vaccine against Rift Valley fever virus (RVFV).The task Greenhalgh. , Amanda Bischoff, and Matthew . Sigman. University of Utah. Describing Electron Transfer Reactions. Marcus, R. A. . The Nobel Prize in Chemistry . 1992 . 1992, . 69-92. Anslyn. , E. V.; Dougherty, D.A (2006) . mRNA. RNA-SEQ. TruSeq. . Stranded. . mRNA. RNA-SEQ. The first . step. in the . workflow. . involves. . purifying. the . poly-A. . containing. . mRNA. . molecules. . using. . poly-T. . oligo. Moon J, Jang Y, Kim N, Park W, Park K, Lee S, et al. Diagnosis of Haemophilus influenzae Pneumonia by Nanopore 16S Amplicon Sequencing of Sputum. Emerg Infect Dis. 2018;24(10):1944-1946. https://doi.org/10.3201/eid2410.180234. Madhukar Pai, MD, PhD. Associate Professor, McGill University, Montreal. Associate Director, McGill International TB Centre. Why you should apply for fellowships and not just CIHR. In academia, the expectation is that we will all raise funds for our research.