High-throughput Sequencer
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High-throughput Sequencer

Dec 2011 – 758 sequencers. Apr 2012 – 823 sequencers. Biomedical Research. 1. – © 2012 Internet2. Source: . http://omicsmaps.com. /. , Dec. 5, 2011. Increasing at 25% per year. Image:. . Illumina.

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High-throughput Sequencer




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Presentation on theme: "High-throughput Sequencer"— Presentation transcript:

Slide1

High-throughput Sequencer

Dec 2011 – 758 sequencers

Apr 2012 – 823 sequencers

Biomedical Research

1 – © 2012 Internet2

Source:

http://omicsmaps.com/, Dec. 5, 2011

Increasing at 25% per year

Image:

Illumina

Slide2

Ion Proton Sequencer

Democratization of Sequencing

2 – © 2012 Internet2

Handheld USB Sequencer

Image: Oxford

Nanopore

Technologies

Image:

Life

Technologies

Slide3

Source: L. D. Stein Genome Biol. 11, 207 (2010)

Moving beyond Moore’s Law

3 – © 2012 Internet2

Slide4

Research Centers Who’s Who

4 – © 2012 Internet2

University

VP / CIO

MedicalSchoolCIO

AcademicMedicalCenterCIO

CancerCenterCIO

GenomicsCenterCIO

Who

does research involving Big Data?

Who does wide area networking?

Who talks with whom?

Who is responsible for security?

Who is collaborative?

Who

is in charge?

Slide5

ESnet Science DMZ for Biomedical Researchers

5 – © 2012 Internet2

Sensitive dataPHILimited data setDe-identifiedSecurityACLs in DMZ switchServer hardeningFirewall issuesEncryptionBest practices guide

Source: http

://fasterdata.es.net/science-dmz/science-dmz-architecture/

Slide6

What do biomedical researchers need today? Tomorrow?Who are the collaborative early adopters?How can we disseminate best practices?Training the trainer workshopsEducational materialsPerformance monitoring and troubleshootingESnet’s Science DMZ architectureSecurity recommendationsWhat is unique in the life sciences?Security IssuesTransport protocolsInternational collaborations

Engaging Biomedical Researchers

6

– © 2012 Internet2