Presentations text content in High-throughput Sequencer
Slide1
High-throughput Sequencer
Dec 2011 – 758 sequencers
Apr 2012 – 823 sequencers
Biomedical Research
1 – © 2012 Internet2
Source:
http://omicsmaps.com/, Dec. 5, 2011
Increasing at 25% per year
Image:
Illumina
Slide2Ion Proton Sequencer
Democratization of Sequencing
2 – © 2012 Internet2
Handheld USB Sequencer
Image: Oxford
Nanopore
Technologies
Image:
Life
Technologies
Slide3Source: L. D. Stein Genome Biol. 11, 207 (2010)
Moving beyond Moore’s Law
3 – © 2012 Internet2
Slide4Research Centers Who’s Who
4 – © 2012 Internet2
University
VP / CIO
MedicalSchoolCIO
AcademicMedicalCenterCIO
CancerCenterCIO
GenomicsCenterCIO
Who
does research involving Big Data?
Who does wide area networking?
Who talks with whom?
Who is responsible for security?
Who is collaborative?
Who
is in charge?
Slide5ESnet Science DMZ for Biomedical Researchers
5 – © 2012 Internet2
Sensitive dataPHILimited data setDe-identifiedSecurityACLs in DMZ switchServer hardeningFirewall issuesEncryptionBest practices guide
Source: http
://fasterdata.es.net/science-dmz/science-dmz-architecture/
Slide6What do biomedical researchers need today? Tomorrow?Who are the collaborative early adopters?How can we disseminate best practices?Training the trainer workshopsEducational materialsPerformance monitoring and troubleshootingESnet’s Science DMZ architectureSecurity recommendationsWhat is unique in the life sciences?Security IssuesTransport protocolsInternational collaborations
Engaging Biomedical Researchers
6
– © 2012 Internet2
High-throughput Sequencer
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