PPT-Working with the Command-Line Interfaced

Chapter 16 Deciphering the Command Line interface Shells Accessing the CommandLine Interface cmd Accessing the CommandLine Interface in Mac OS X and Linux terminal The Command Prompt Cgt usernamehome. is the GNU debugger on our CS . machines. . gdb. is most effective when it is debugging a program that has debugging symbols linked in to it. With . gcc. and g++, this is accomplished using the . -g . Get that . Linux.  feeling - on . Windows. http://cygwin.com/. 1. Outline. What is Cygwin?. Why learn it?. The basic commands. Combining commands in scripts. How to get more information. 2. What is Cygwin. T. A. Herring R. W. King M. A. Floyd. Massachusetts Institute of Technology. GPS Data Processing and Analysis with GAMIT/GLOBK/TRACK. UNAVCO . Headquarters. , Boulder, Colorado. 10–14 August 2015. Data Analysis. Karsten Hokamp, PhD. Genetics. TCD, 03/11/2016. GE3M25 sub-parts. Python. Programming. Bioinformatics. ChIP. -. Seq analysis. Statistics. Class 1: . ChIP-seq. data analysis in a nutshell. It’s free.. You can add lots of capabilities. For free. . There are “packages” online. You can write your own functions relatively easily. Command line or GUI. Bandwagon. Communication across disciplines. Points. Joseph Ramsey. LiNGAM. Most of the algorithms included in Tetrad (other than KPC) assume causal graphs are to be inferred from conditional independence tests.. Usually tests that assume linearity and Gaussianity.. Command-Line Interface. Chapter 18. Overview. In this chapter, you will learn how to:. Explain the operation of the command-line interface. Describe fundamental commands. Explain file manipulation. Describe additional useful Windows commands. Saleh Khazaei. http://ceit.aut.ac.ir/~Khazaei/linux.pptx. Commands . Cat – prints context of a file. more / less . head / tail ( e.g. -n10 ). f. ile. g. rep. ( -. i. , -n , -c ). w. c. ( -c , -m , -l , -w ). Getting Connected – Account. First, you need to request. an account.. This is called the Apply. process for our network.. You want to Register or . Login with previous creds.. You'll receive an email to. Presented by: CIA/HPC Team . Feb 10, 2017. Copy Gaussian into your account. Check . that you are in your local home. . p. wd. Output should look like: . /home/. yourUSERID. cp. -r /software/. gaussian. ~ For the . Inquisitive . Mac Sysadmin ~. Part I of ??. Who is this guy?. Sr. Application Developer @ The Wharton School, UPENN. Run, with an excellent team, a Linux (RHEL) HPC research cluster. Much of my job entails scripting (bash, . Archiving And Backup. Prepared by Dr. Reyes, New York City College of Technology. gzip. . Command. gzip. – command used to compress one or more files. Example:. gunzip. . Command. gunzip. – command used to decompress files. Readings: Chapter 15. sed. Stream Editor (sed) . A batch editor. Transforms input stream from a file or standard input. Frequently used as filter in a pipe. sed can test, branch, substitute, hold, and exchange data. Don Johnson of BU . IS&T. We’ll start with a sign in sheet that include questions about your Linux experience and goals.. We’ll end with a class evaluation.. We’ll cover as much as we can in the time allowed, starting with the easiest and most important material. Don’t feel rushed; if we don’t cover everything, you’ll pick it up as you continue working with Linux..