PPT-A tutorial on how (not) to over-interpret STRUCTURE/ADMIXTURE bar plots

Daniel Falush Dan Lawson Lucy van Dorp Europeans West Africans Hispanics African Americans 1000 genomes project STRUCTUREADMIXTURE bar plots represent ancestry proportions after recent admixture . Where do the Bode diagram lines comes from 1 Determine the Transfer Function of the system 2 Rewrite it by factoring both the numerator and denominator into the standard form sp Kz where the s are called zeros and the s are called poles 3 Replace wi and . admixture . among . human populations . Katarzyna. Bryc. OEB 275br. February 19, 2013. Outline. The field of population genetics. Learning about human history from genetics. Out of Africa settlement of continents. Concrete Waterproofing Admixture . Industry 2015 Market Research Report. 3422 SW 15 Street, . Suit #8138, Deerfield Beach, . Florida 33442, USA. Tel: +1-386-310-3803. www.qyresearchgroup.com. sales@qyresearchgroup.com. Tinker with Tinker Plots. Elaine Watkins, Senior Curriculum Officer, Numeracy. Graphs in the curriculum. Graphs play a significant role in the mathematics curriculum, providing visual means of presenting information.. Don’t use default Excel plots!. Figure . should highlight the key relationships in the data. .. Should . be clear - no extraneous legends, lines, only use annotations when they add real explanatory value.  . Plots and Stuff. 1. A plot is. a two-dimensional display. (. it fits on a sheet of paper. ). of. points. or. curves. or. regions. .. Plots and Stuff. 2. Plots and Stuff. 3. (5,8). x. y. (8,22). points. XML STRUCTURE . The most basic building blocks of an XML file are . elements. , . attributes. and . comments.. Compiled based on Tutorial PhUSE 2008 XML by eXaMpLe authored by Raymond Ebben OCS consulting, The Netherlands. New . planks in an old campaign. Nicholas J. Cox. Department of Geography. 1. Quantile plots. Quantile plots show . ordered . values (raw data, estimates, residuals, whatever) . against . rank . or cumulative probability or a one-to-one function of . ACGT Retreat 2012. Jean-François . Taly. , . Ionas. . Erb. and . Cedrik. . Magis. What is T-Coffee ?. T. ree based . C. onsistency based . O. bjective . F. unction . F. or . Alignm. E. nt. . E. valuation. Course 2. Warm Up. Problem of the Day. Lesson Presentation. Warm Up. Use the data below for Questions 1-4.. 14, 25, 37, 53, 26, 12, 70, 31. 1.. What is the mean?. 2.. What is the median?. 3.. What is the mode?. 5.0. This chapter will cover 2D (two-dimensional) plots. Many options:. Linear, semi-logarithmic, logarithmic axes. Line type, color, thickness. Lots of different data-point markers. Grid lines, titles, text comments, legends. (b)ADMIXTURE Aritra Bose FEBRUARY, 2019 A Auton et al . Nature 526 , 68-74 (2015) doi:10.1038/nature15393 Population Structure Mutation Mutations are changes to the base pair sequence of the DNA. The Time and Place of European Gene Flow into Ashkenazi Jews Shai Carmi The Hebrew University of Jerusalem 2016 Joint work with Itsik Pe’er , James Xue (Columbia University) Ashkenazi History: Known Nicholas J. Cox. Department of Geography. 1. Quantile plots. Quantile plots show . ordered . values (raw data, estimates, residuals, whatever) . against . rank . or cumulative probability or a one-to-one function of .