PPT-Motif

discovery EM algorithm Gibbs Sampler Enumeration Regression Other methods Phylogenetic trees Purpose Construction Finding significance Not directly related to todays topic EM algorithm tutorial. What’s a motif paper?. A motif paper allows you to focus on an aspect of a short story, play, or novel. . By exploring a single motif, you are able to draw conclusions and offer insight into the motivation or message of a particular piece of literature.. Simon Andrews. simon.andrews@babraham.ac.uk. @. simon_andrews. v. 1.0. 1. Rationale. 2. Gene A. Gene B. Gene C. Hit A. Hit B. Hit C. Prom A. Prom B. Prom C. GGATCC. GGATCC. GGATCC. Basic Questions. Does the sequence around my hits look unusual?. Near-Duplicate Figures. Thanawin (Art) Rakthanmanon, . Qiang. Zhu,. Eamonn. J. Keogh. What is a near-duplicate pattern (motif)?. [20] A synopsis of the British . Diatomaceae. , 1853. [15] A history of . Zhizhuo. Zhang . Outline. Review of Mixture Model and EM algorithm. Importance Sampling. Re-sampling EM. Extending EM. Integrate Other Features. Result. Review Motif Finding: Mixture modeling. Given a dataset . Alignment.. Model parameters from neutral sequence. Estimation example. Estimation example 2. HMM version. Protein Coding Gene. Known. non-. coding gene: . XIST. ch10. chX. RepA. Different gene conservation patterns. Allusions . Allusion: Definition. A reference in a literary text to a well-known person or place, or to a historical, political, or cultural event. The reference can also be to literary, religious, or mythological text.. Sparsification for Graph Clustering. Peixiang Zhao. Department of Computer Science. Florida State University. zhao@cs.fsu.edu. Synopsis. Introduction. gSparsify. : Graph motif based sparsification. Cluster significance. discussion questions . CHAPTER 3. Re-read the first part of page 32 (“Never shall I forget…”). Discuss the motif of night, both in this passage and in the text so far.. CHAPTER 3. Fire is another important motif in this chapter. How is the motif of fire used, both literally and figuratively?. While you can find motifs and discords (anomalies) without computing the Matrix Profile, examining the full Matrix Profile can often give you extra insights and context. . In this document we present some more or less random examples of the Matrix Profile for diverse datasets, in order to sharpen your intuitions. . Three Important Devices: Know These. Symbol: An object that represents something more significant that just itself. Motif: A . recurring. element or idea; a phrase; image; repetition of similar symbols; repetition of an issue/attitude. What is it. ?. Also, one of each in the middle (motif assignment, motif examples. , chapter 12 HW). Motif Defined. In a literary work, a motif can be seen as an image, sound, action, concept or other figure, that has symbolic significance and contributes toward the development of theme (Webster).. & . Motifs. Learning Targets. :. Students will be able to identify the difference between a symbol and a . motif . and . consider its impact on a work of literature. .. Students will be able to list common . simon.andrews@babraham.ac.uk. @. simon_andrews. v. 1.0. 1. Rationale. 2. Gene A. Gene B. Gene C. Hit A. Hit B. Hit C. Prom A. Prom B. Prom C. GGATCC. GGATCC. GGATCC. Basic Questions. Does the sequence around my hits look unusual?. Motif 4. Motif 4. Motif 5. Motif 6. Supplementary . Figure . S2. . Amino acid sequence alignment of the five members of the Arabidopsis PAR1-family proteins (LAT1-5) shows a number of conserved regions and motifs throughout the protein sequence. Motifs were identified using Multiple .