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Community Ecology (Toti-omics) Community Ecology (Toti-omics)

Community Ecology (Toti-omics) - PowerPoint Presentation

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Community Ecology (Toti-omics) - PPT Presentation

Geography Resources Phylogeny Community Redrawn from Fauth et al 1996 Community collection of species that occur at the same place amp time circumscribed by natural eg serpentine soil arbitrary or artificial ID: 932541

ecology community species amp community ecology amp species historic landmarks photo local connell redrawn patterns guild selection ecological interactions

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Slide1

Community Ecology

(Toti-omics)

Slide2

Geography

Resources

Phylogeny

Community

Redrawn from Fauth

et al

. (1996)

Community

– collection of species that occur at the same place & time, circumscribed by natural (

e.g

., serpentine soil), arbitrary, or artificial (

e.g

.,

1-m

2

quadrat) boundaries

Many prefer a more

restrictive definition

in which species must interact to be included,

e.g.

, Whittaker (1975)

Slide3

Geography

Resources

Phylogeny

Taxon

Taxon

– phylogenetically related group of species; a

clade

or

phylad

E.g.

, Mammalian Order Rodentia

Community

Redrawn from Fauth

et al

. (1996)

Slide4

Geography

Resources

Phylogeny

Community

Guild

Guild

– a group of species “without regard for taxonomic position” that “exploit the same class of environmental resources in a similar way” (Root 1967)

E.g.

, granivores

Taxon

Redrawn from Fauth

et al

. (1996)

Slide5

Geography

Resources

Phylogeny

Community

Guild

Local

guild

Local guild

– a group of species that share a common resource and occur in the same community

(Root 1967)

E.g.

, Sonoran Desert granivores

Taxon

Redrawn from Fauth

et al

. (1996)

Slide6

Geography

Resources

Phylogeny

Community

Guild

Local

guild

Assemblage

Assemblage

– a group of phylogenetically related species within a community

Taxon

Redrawn from Fauth

et al

. (1996)

Slide7

Geography

Resources

Phylogeny

Community

Guild

Local

guild

Assemblage

Assemblage

– a group of phylogenetically related species within a community

a.k.a. “

Taxocene

” (Hutchinson 1967)

E.g.

, Sonoran Desert rodents

Taxon

Redrawn from Fauth

et al

. (1996)

Slide8

Geography

Resources

Phylogeny

Community

Guild

Taxon

Ensemble

Local

guild

Assemblage

Ensemble

– a phylogenetically bounded group of species that use a similar set of resources within a community

E.g.

, Sonoran Desert granivorous rodents

Redrawn from Fauth

et al

. (1996)

Slide9

Geography

Resources

Phylogeny

Community

Guild

Taxon

Local

guild

Assemblage

E.g

.,

granivorous rodents,

pond-breeding salamanders…

Ensemble

In this course any collection of two or

more species is

“fair game” for close

scrutiny

Redrawn from Fauth

et al

. (1996)

Slide10

Any set of organisms currently living near each other and

about which it is interesting to talk

” (MacArthur 1971)

Painting by D. Kaspari for M. Kaspari (2008) – anniversary reflection on MacArthur (1958)

Robert H. MacArthur’s definition of Community

Slide11

Some historic landmarks

Community Ecology

has matured from purely descriptive studies (

i.e.

, description & analysis of

patterns

) to mechanistic studies (

i.e.

, investigations into

processes) that aim to improve our explanatory & predictive abilities

In any case, the tradition of good Natural History is not ignored by the best modern practitioners

Community Ecology

Though I do not believe that a plant will spring up where no seed has been, I have great faith in a seed. Convince me that you have a seed there, and I am prepared to expect wonders.” (H. D. Thoreau ~1860)

Slide12

Some historic landmarks

Community Ecology

Photo of

Darwin

from WikiMedia Commons

Charles Darwin (1809 - 1882)

Ernst Haeckel (1834 - 1919)

coined “

oekologie

for the study of Darwin’s multifaceted “struggle for existence”

Not the first “ecologist,” but clearly recognized the importance of organisms’

interactions

(intraspecific, interspecific & with their abiotic environments) for evolution by natural selection

Slide13

Some historic landmarks

Community Ecology

Photo of

Darwin

from WikiMedia Commons

Charles Darwin (1809 - 1882)

On

biotic interactions

:

Hence it is quite credible that the presence of a feline animal in large numbers in a district might determine, through the intervention first of mice and then of bees, the frequency of certain flowers in that district!

” (Darwin 1859)

Slide14

Some historic landmarks

Community Ecology

Photo of

Darwin

from WikiMedia Commons

Charles Darwin (1809 - 1882)

On

abiotic processes

,

e.g.

, abiotic disturbance:

If turf which has long been mown… be let to grow, the most vigorous plants gradually kill the less vigorous, though fully grown plants; thus out of 20 species growing on a little plot of mown turf (3 feet by 4 feet) nine species perished from the other species being allowed to grow up freely…

” (Darwin 1859)

Slide15

Some historic landmarks

Community Ecology

Photo of

Richards

from WikiMedia Commons; for further details see Damschen

et al

. (2005)

Ellen Swallow Richards (1842 - 1911)

Chemist who probably “created and taught the first ecology curriculum” in the U.S. and may have introduced the term “

ecology

” into the English language (from Ernst Haeckel’s “

oekologie

”)

Slide16

Some historic landmarks

Photo of

Forbes

from http://home.grics.net...

Stephen Forbes (1844 - 1930)

Community Ecology

One of the earliest ecologists to examine multiple, cross-trophic level interactions simultaneously within an explicitly evolutionary framework

Wondered how in spite of a constant “struggle for existence” some

balance

is nevertheless maintained in

ecosystems

(see:

The lake as a microcosm,

1887)

Slide17

Some historic landmarks

Community Ecology

Photo of

Cowles

from http://oz.plymouth.edu...

Photo of

Lake Michigan sand dune

from http://ebeltz.net...

Henry Cowles (1869 - 1939)

A pioneer of “

dynamic ecology

,” especially on the sand dunes of Lake Michigan

Slide18

Some historic landmarks

Community Ecology

In the grand traditions of

Alexander von Humboldt (1769 - 1859; the “father of biogeography”)

&

Alfred Russel Wallace (1823 - 1913)

Clinton Hart Merriam (1855 - 1942)

also noticed that geographic changes in physical conditions often coincide with changes in biotaMerriam devised Empirical Life Zones (similar biotic changes with increased elevation or latitude)

Slide19

Some historic landmarks

Community Ecology

Leslie Holdridge (1907 - 1999)

– devised

Theoretical Life Zones

(1947)

Image from WikiMedia Commons

Slide20

Some historic landmarks

Community Ecology

Clements

vs.

Gleason

(1920s & 1930s)

Frederic Clements (1874 - 1945)

– thought succession always reached a predictable

climax community

; viewed communities metaphorically as “superorganisms”

Henry Gleason (1882 - 1975)

– proposed the “

individualistic concept

” of communities; discrete populations whose patterns of distribution and abundance give rise to communities as epiphenomena

Slide21

Photo of

Whittaker

from WikiMedia Commons; figures from http://ecology.botany.ufl.edu...

Some historic landmarks

Community Ecology

Robert H. Whittaker (1869 - 1939)

His

gradient analyses

helped end the

Clements-Gleason debate

Slide22

Some historic landmarks

Community Ecology

We continue to need good descriptions of patterns, often supported by sound, quantitative techniques

See: The Ordination Web Page (

http://ordination.okstate.edu

)

E.g.,

the Ecological Society of America, The Nature Conservancy, the U.S. Geological Survey, the U.S. National Park Service & others collaborate to continue to refine the

National Vegetation Classification Standard (NVCS)

E.g.

,

Bray & Curtis (1957)

introduced

ordination methods

to define plant communities in Wisconsin

Slide23

Photo of

Davis

from U. Minnesota; photo of

pollen

from http://www.gl.rhbnc.ac.uk...

Some historic landmarks

Community Ecology

Margaret Davis (b. 1931)

Her paleo-ecological perspective has

helped increase awareness of

historical contingencies

Slide24

Photo of

Connell

from UCSB

Some historic landmarks

Community Ecology

Joseph H. Connell (b. 1923)

Heralded as milestones in ecology, his studies demonstrated the utility of

field experiments

for answering ecological questions; empirically assessed

multiple hypotheses

for intertidal zonation

The concept of

equifinality

was formalized by

Ludwig von Bertalanffy (1968; founder of General Systems Theory) – multiple hypotheses or mechanisms can equally explain or generate the same pattern

Slide25

Some historic landmarks

Community Ecology

Joseph H. Connell (b. 1923)

Observations:

Balanus balanoides

– Larger barnacle, generally found lower in the intertidal

Chthamalus stellatus

– Smaller barnacle, generally found higher in the intertidal

Photo of

Connell

from UCSB

Slide26

Some historic landmarks

Community Ecology

Joseph H. Connell (b. 1923)

Photo of

Connell

from UCSB

Slide27

Some historic landmarks

Why might these patterns exist?

Community Ecology

Joseph H. Connell (b. 1923)

Observations of Pattern:

Balanus balanoides

– Larger barnacle, generally found lower in the intertidal

Chthamalus stellatus

– Smaller barnacle, generally found higher in the intertidal

Photo of

Connell

from UCSB

Slide28

Some historic landmarks

Community Ecology

Joseph H. Connell (b. 1923)

Mechanistic Hypotheses:

Differential

physiological tolerances to desiccation and submersion

Interspecific competition

Predation (

e.g., Thais lapillus is a predator of Balanus balanoides)

Photo of Connell from UCSB

Slide29

Some historic landmarks

Community Ecology

Joseph H. Connell (b. 1923)

Testable Predictions:

If physiology determines distribution patterns,

to remove potential competitors or predators should have no effect

If competition/predation determines distribution

patterns, to remove competitors/predators

should result in altered patterns of distribution

Photo of

Connell

from UCSB

Slide30

Some historic landmarks

Community Ecology

Joseph H. Connell (b. 1923)

Exclusion experiments, results & conclusions:

The absence of competitors & predators produced no change in upper level of distributions

For

Chthamalus

, removing

Balanus

increased downslope survivorship & distribution

For

Balanus, removing Thais increased downslope survivorship & distribution

Photo of Connell from UCSB

Slide31

Some historic landmarks

Community Ecology

Joseph H. Connell (b. 1923)

Photo of

Connell

from UCSB; figure from Connell (1961; one of Connell’s 5 Science Citation Classics)

Slide32

Some historic landmarks

Photo of

MacArthur

from Wikipedia

Community Ecology

Robert H. MacArthur (1930 - 1972)

More than most of his predecessors, MacArthur demonstrated the utility of

simplifying assumptions

combined with

mathematical rigor

for exploring ecological problems

Criticisms: oversimplification; over-emphasized competition & equilibria

Slide33

Some historic landmarks

Community Ecology

G. Evelyn Hutchinson (1903 - 1991)

Photo of

Hutchinson

from Yale Peabody Archives

Conceived of

fundamental

vs.

realized

niche

spaces

or hyper-volumes

“Ecologists use the metaphor of the ‘ecological niche’ to express the idea that plant and animal species play certain roles in the ecological community” (Kingsland 2005, pg. 1)

Slide34

Some historic landmarks

Figure from Gotelli & Graves (1996, pg. x)

Community Ecology

G. Evelyn Hutchinson

The idea & disagreement over how to

test it helped motivate the development

of

null models in ecology

E.g.

, Hutchinsonian ratios

A ratio of ~ 1.3 in size

occurs between pairs of

coexisting species,

possibly owing to inter- specific competition

Slide35

Community Ecology

Some historic landmarks

Null hypotheses [models]

entertain the possibility that nothing has happened…

” (Strong 1980)

A

null model

is a pattern-generating model that is based on

randomization of ecological data or random sampling from a known or imagined distribution. The null model is designed with respect to some ecological or evolutionary process of interest. Certain elements of the data are held constant, and others are allowed to vary stochastically to create new assemblage patterns. The randomization is designed to produce a pattern that would be expected in the absence of a particular ecological mechanism…” (Gotelli & Graves 1996)

Slide36

Some historic landmarks

Community Ecology

Photo of

Hubbell

from UCLA

Stephen P. Hubbell (b. 1942)

Neutral theory

asks how well community-level patterns conform to predictions under the simplifying assumption that all individuals are equal (in terms of probability of recruiting, dying, and replacing themselves through reproduction)

When we look at the plants and bushes clothing an entangled bank, we are tempted to attribute their proportional numbers and kinds to what we call chance. But how false a view is this!

(C. Darwin 1859)

Slide37

Patterns

– any observable properties of the natural world, often expressed as variable quantities

or distributions (since variation characterizes

every level of biological organization)

Processes

– the causal

mechanisms

that give rise to the patterns

See also Watt (1947) “Pattern and process in the plant community” –

J. Ecology

Community Ecology

Patterns & Processes

Slide38

Community Assembly / Coalescence

From: J. N. Thompson

et al

. 2001. Frontiers of Ecology.

BioScience

51:15-24.

“We use the term

community coalescence

to refer to the development of complex ecological communities from a regional species pool. This coalescence depends on interactions among species availability,

physical environment, evolutionary history, and temporal

sequence of assembly.”

Slide39

Processes that determine local community composition

(most of which produce community structure that

wouldn’t be predicted by null models)

Redrawn from Morin (1999, pg. 27)

Slide40

Community A

Community B

What relative contributions do the various processes make (and have made) towards maintaining (and originally creating) differences between communities A and B?

Processes that determine local community composition

(most of which produce community structure that

wouldn’t be predicted by null models)

Redrawn from Morin (1999, pg. 27)

Slide41

Processes that determine local community composition

(most of which produce community structure that

wouldn’t be predicted by null models)

From HilleRisLambers

et al

. (2012, pg. 228)

Slide42

Processes

Drift

Migration

Selection

Abiotic environment

Biotic interactions

(

e.g.

, competition, predation,

etc

.)

Speciation

… and extinction (owing to drift & selection)

Primary patterns

(across space & time)

Species diversity

Species composition (identity & traits)

Species abundances

Emergent patterns

Productivity

Stability

Food-web connectance

Etc

.

Redrawn from Vellend & Orrock (2010)

These affect biological variants,

i.e.

, alleles or species

Parallels between Community Ecology & Population Genetics

Slide43

Local

community

Regional community

Global community

Drift

Selection

Speciation

Drift

Selection

Speciation

Drift

Selection

Speciation

Migration

Migration

Migration

Migration

Redrawn from Vellend & Orrock (2010)

Parallels between Community Ecology & Population Genetics

Slide44

Local

community A

Regional community

Global community

Drift

Selection

Speciation

Drift

Selection

Speciation

Drift

Selection

Speciation

Migration

Migration

Local

community B

Drift

Selection

Speciation

Redrawn from Vellend & Orrock (2010)

Parallels between Community Ecology & Population Genetics

Migration

Migration

Slide45

Redrawn from Vellend (2010)

Parallels between Community Ecology & Population Genetics

species are added to

communities via speciation and dispersal,

and the relative abundances of these species are then shaped by drift and selection, as well as ongoing dispersal, to drive community dynamics

Local

community A

Regional community

Local

community B

Slide46

Local

community A

Global community

Local

community B

Parallels between Community Ecology & Evolutionary Theory

From Roughgarden (2009)

Local interactions

Local interactions

In a parallel fashion the “

formational theory of communnity ecology

” could be: “

local interactions act upon the species arriving at the community’s boundary to produce a diversity of communities

the central narrative of evolutionary theory is that

variation originates from random mutation and

then natural selection in a local setting acts upon this variation to produce organic diversity

Supply-side

ecology

Supply-side

ecology

Slide47

A

B

Competition

-

-

Influence of species A

Influence of Species B

+ (positive)

0 (neutral/null)

- (negative)

A

B

Amensalism

0

-

A

B

Antagonism /

Contramensalism

(Predation / Parasitism)

+

-

A

B

Commensalism

+

0

A

B

Neutralism

(No interaction)

0

0

A

B

Commensalism

0

+

A

B

Mutualism

+

+

A

B

Amensalism

-

0

A

B

Antagonism /

Contramensalism

(Predation / Parasitism)

-

+

-

0

+

Pair-wise species interactions

(owing to acquisition or assimilation of resources,

etc

.)

Redrawn from Abrahamson (1989); Morin (1999, pg. 21)

Slide48

Interactions are often

asymmetric

, even when the sign of the interaction is the same in both directions (

e.g., obligate

for one organism, but

facultative

for the other)

Pair-wise species interactions

Species A

Species B

+

/

+

_ / +

+ / _

_ / _

Slide49

In any case, the

laws of physics & chemistry

apply

(e.g., thermodynamics & stoichiometry)

Are there “laws” specific to Ecology,

and Community Ecology in particular?

Laws in Community Ecology

Slide50

To separate

Ecology

and

Evolution

into separate

disciplines is somewhat artificial

Nothing in biology makes sense except in the light of evolution

(T. Dobzhansky [an architect of the Modern Synthesis] 1973)

All organisms interact with other organisms, both conspecific and heterospecific, and their environments; i.e., the evolutionary play takes place within an ecological theater

(G. E. Hutchinson 1965)

Ecologists and evolutionary biologists must recognize and embrace the complexity of natural ecosystems to understand them, and their components, much as Zen masters recognize and embrace the interconnectedness of the universe

(D. P. Barash 1973)

…just as is completely separating

Community Ecologyfrom other related sub-disciplines