Wild Type Microbes W ild type is the typical form of a species found in nature A wild type microbe can be selected for use in industry due to it exhibiting a desirable genetic trait ID: 931523
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Slide1
Higher Biology
Unit 2
2.7 Genetic Control of Metabolism
Wild Type Microbes
W
ild type
is the typical
form
of a species found in
nature
.
A wild type microbe can be selected for use in industry due to it exhibiting a
desirable genetic trait
.
Even with this desirable trait, it may lack other important traits.
S
cientists try to
improve
the microbe to include the genetic material for these other traits.
Slide3Wild Type Microbes
Examples of traits hoped to be gained by
strain improvement
include;
the ability
to grow on low cost growth
medium
g
enetic stability
production of large quantities of secondary
metabolites
Slide4Wild Type Microbes
Wild types of microbes are improved for use in biotechnology by
altering the microbe’s
genome.
This can be done in different ways;
Mutagenesis
Selective Breeding
Recombinant DNA
Slide5Mutagenesis
Mutagenesis is the creation
of
mutations
.
In nature, mutations;
a
re rare
o
ccur spontaneously and at randomare usually detrimental to the organism
Slide6Mutagenesis
The
rate of
mutation can
be increased by the use of
mutagenic
agents
.
Examples include;
radiation e.g. UV light and
X rays
c
hemicals such as mustard gas
Slide7Mutagenesis
On
very rare occasions,
a
mutant
allele can arise
that confers an advantage
to the
organism or endows it with a new property that
is useful to humans.
Therefore, mutagenesis can be useful during industrial processes as a microbe may develop a new property that proves useful to humans.
Slide8Mutagenesis
Unfortunately, mutated
strains of
microbes tend to be
genetically unstable
.
This means
they
sometimes undergo a reverse mutation
, reverting to
the
original (and less useful) wild type.This would be very costly in terms of time and
resources
.
In industry, an improved
strain of
microbe must be
monitored regularly to ensure that
it is
still in its mutated
form before
it is
used.
Slide9Selective Breeding
Sexual
Reproduction
Two parents
Fusion of
male & female
gametes,
forming a
zygote
Offspring show variation
Some eukaryotic cells e.g. yeasts
Asexual
Reproduction
One parent
No gametes involved
Offspring are clones
Some eukaryotic cells e.g. yeasts
Bacteria
Slide10Selective Breeding
By
deliberately crossing different strains
during breeding
programmes, scientists are able to
produce new strains of microbes.
On
some
occasions,
a new strain combines two desirable characteristics, one from each parent.
Slide11Selective Breeding
Slide12Selective Breeding
Horizontal Transfer
Although bacteria
don’t
reproduce sexually, new strains can arise as a result of
horizontal transfer
of genetic material.
During this, plasmids
or pieces of
DNA can be
transferred from one strain to
another via a
conjugation tube.
Slide13Selective Breeding
Horizontal Transfer
New strains are also produced by bacteria taking up
DNA
fragments from their environment.
Scientists try to
produce new strains of useful bacteria by culturing
existing strains
together in conditions where horizontal transfer of DNA is most likely to
occur.
Slide14Recombinant DNA
This is the transfer of genes
from
one organism
to
another (can be of different species).
Think:
genetic engineering
from National 5
.This allows bacteria to produce plant
or animal proteins e.g. human insulin.
The bacterium is
said to be artificially transformed
.
Slide15Enzymes
In recombinant DNA, two different types of enzyme are used
;
restriction endonucleases
ligase
Slide16Restriction Endonucleases
These enzymes are taken from microbes
They are used
to cut DNA
from both the donor and the receiving plasmid
They recognise
specific sequences
of DNA bases
called restriction sites
Slide17Restriction Endonucleases
The
same
restriction endonuclease
must be used to cut both donor and plasmid
This ensures the
ends of
both
DNA fragments have DNA bases that are complementary
to each other
The ends of the cut DNA fragments are
described as “sticky”
Slide18Restriction Endonucleases
The
sticky ends
of the required gene and plasmid
stick
together because their DNA bases are
complimentary
Slide19Ligase
These enzymes stick the DNA fragments together.
This seals the desired gene into the plasmid
Each end of the fragments must have complementary bases
Slide20Vectors
In recombinant DNA, the gene is transferred
by a
vector
.
The vector is usually a
plasmid
or an
artificial chromosome.
Artificial chromosomes can transfer much longer DNA sequences
Slide21Vectors
To be an effective vector, a plasmid must have three
features;
r
estriction site
marker gene
o
rigin of replication
Restriction
site
Marker
gene
Origin
of
replication
Slide22Restriction site
M
ust
be able to be
opened
with the
same
restriction endonuclease
used
to cut open the donor DNAThis ensures that the sticky ends of both donor DNA and the plasmid DNA are
complementary
Slide23Marker gene
This gene
shows if the cell
has
taken
up the
plasmid.
It is usually a gene that gives the bacterium resistance
to an antibiotic
.A
ny cell
that
hasn’t taken up the plasmid will die as it has no resistance to the antibiotic
Slide24Origin of replication
This consists of genes that control
self replication
of the
plasmid
It is needed to make many
copies of the plasmid
(carrying
the desired gene) within the
bacterial cell
.
Slide25Recombinant DNA
Improvements made to microbes include;
Amplifying specific
steps in a metabolic
pathway or removing
inhibitors to
increase the yield of desired product
.
The ability to secrete product into the
surrounding medium. This allows
it to be collected
easily,
saving resources.Ensuring it can’t
survive in
the
external environment. This is a
safety precaution
.
Slide26Recombinant Y
east Cells
Sometimes there are problems with bacterial cells producing the desired protein e.g.
They don't secrete the
protein into the
surrounding medium
T
hey degrade the protein before it can be collected
Slide27Recombinant Y
east Cells
In these cases,
genetically transformed eukaryotic cells
e.g. yeast is a preferable option.
This is despite eukaryotic cells having more demanding cultural conditions.