PPT-Phylogenetic Analysis – Part 2
Author : debby-jeon | Published Date : 2017-05-27
Spring 2014 Outline Why do we do phylogenetics cladistics How do we build a tree Do we believe the tree Applications of phylogenetics cladistics Why do we do phylogenetic
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Phylogenetic Analysis – Part 2: Transcript
Spring 2014 Outline Why do we do phylogenetics cladistics How do we build a tree Do we believe the tree Applications of phylogenetics cladistics Why do we do phylogenetic analyses Evolutionary interpretation of relationships between organisms. Central question in community ecology. What processes are responsible for the identity and relative abundances of co-occurring species in local assemblages?. What is the relative importance of different ecological processes in structuring communities. Tools. Tara and . Pawel. Concept Map. Start with Known Sequence. Download MEGA (Molecular Evolutionary Genetics Analysis). http://www.megasoftware.net/. Use MEGA Web Browser to Find Related Sequences. Spring . 2014. Outline. Systematics. Phenetics (brief review). Phylogenetics & Characters. Evolutionary Trees. Systematics. Science of organismal diversity.. Discovery, description and interpretation of biological diversity.. 69 brought to you by CORE View metadata, citation and similar papers at core.ac.uk B. BRUVO-MAĐARIĆ: Molekularne �logenetske metode u entomologiji – nove spoznaje u evolucijskim odnosi Ishii A, Thomas Y, Moonga L, Nakamura I, Ohnuma A, Hang’ombe BM, et al. Novel Arenavirus, Zambia. Emerg Infect Dis. 2011;17(10):1921-1924. https://doi.org/10.3201/eid1710.101452. Nielsen SC, Mourier T, Baandrup U, Søland T, Bertelsen M, Gilbert M, et al. Probable Transmission of Coxsackie B3 Virus from Human to Chimpanzee, Denmark. Emerg Infect Dis. 2012;18(7):1163-1165. https://doi.org/10.3201/eid1807.111689. Takada N, Fujita H, Kawabata H, Takajo I, Sakata A, Takano A, et al. Spotted Fever Group Rickettsia sp. Closely Related to R. japonica, Thailand. Emerg Infect Dis. 2009;15(4):610-611. https://doi.org/10.3201/eid1504.071271. Tandy Warnow. Department of Computer Science. The Computational Historical Linguistics Project. http://. tandy.cs.illinois.edu. /. histling.html. Collaboration with Don . Ringe. began. in 1994; 17 papers since then, and two . Avellón A, Casas I, Trallero G, Pérez C, Tenorio A, Palacios G. Molecular Analysis of Echovirus 13 Isolates and Aseptic Meningitis, Spain. Emerg Infect Dis. 2003;9(8):934-941. https://doi.org/10.3201/eid0908.030080. Smits SL, Zijlstra E, van Hellemond JJ, Schapendonk C, Bodewes R, Schürch AC, et al. Novel Cyclovirus in Human Cerebrospinal Fluid, Malawi, 2010–2011. Emerg Infect Dis. 2013;19(9):1511-1513. https://doi.org/10.3201/eid1909.130404. . virus. . from naturally infected chickens in northern Iraq (. kurdistan. Region. ). Salahaddin University - Erbil . Agriculture Faculty. Animal Science Department. Authors:. Prof. Dr. . Shony. Terminology. phylogeny . evolutionary history of a species or group of species. systematics. . classifying and determining evolutionary relationships of organisms . taxonomy . classifying and naming of organisms. Cottell JL, Webber MA, Coldham NG, Taylor DL, Cerdeño-Tárraga AM, Hauser H, et al. Complete Sequence and Molecular Epidemiology of IncK Epidemic Plasmid Encoding blaCTX-M-14. Emerg Infect Dis. 2011;17(4):645-652. https://doi.org/10.3201/eid1704.101009. Guan D, Li W, Su J, Fang L, Takeda N, Wakita T, et al. Asian Musk Shrew as a Reservoir of Rat Hepatitis E Virus, China. Emerg Infect Dis. 2013;19(8):1341-1343. https://doi.org/10.3201/eid1908.130069.
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