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58SHAPING FUTURE GROWTHORGANIZATIONAL PRUNINGHuman ResourcesWORKSHEET IPrePlanning Discussion Team PurposeWhat is the core purpose of your teamWhat are your department146s primary functions What are. Jiao Tong University . Shanghai, China . June 17, 2013 . The Bridges of Konigsberg . Euler, 1736. A Prescient Observation by Euler. Euler said: . Phylogenomics. . (Phylogenetic estimation from whole genomes). Orangutan. Gorilla. Chimpanzee. Human. From the Tree of the Life Website,. University of Arizona. Species Tree. Large-scale statistical phylogeny estimation. Ephesians 3:14-19. Tim “TA” Adams. Associate Pastor. July . 6. , 2014. “The secret of the life of a tree is that it remains rooted in something other and deeper than itself.”. Brother . Lawrence. Phylogenetics. Phylogenetics. is the study of the evolutionary history of living organisms using . treelike diagrams . to represent pedigrees of these organisms. .. The tree branching . patterns. representing . Trees. Spring 2014. Sukumar Ghosh. What is a tree?. Rooted tree: recursive definition. Rooted tree terminology. Rooted tree terminology. A . subtree. Rooted tree terminology. Important properties of trees. BioE. 598 . Algorithmic Computational Biology. Phylogenomics. Genome-scale evolution. The multi-species coalescent, and gene tree incongruence due to incomplete lineage sorting (ILS). Estimating species trees in the presence of ILS. sequence . alignments . Kyrylo. . Bessonov. November 26th, 2013. Talk plan . How to build phylogenetic trees of types. Unrooted. Rooted. Context . comparison of viral proteins of dengue virus. Examples on phylogenetic tree building. How we’ve thought about trees so far. Good for determining ancestry. Can be good for quickly finding an element. Other kinds of uses?. Any thoughts?. Finding a minimum/maximum…. (heaps are probably just as good or better). On Hadoop. Ted Malaska. 2. Schedule. Intro. Overview of Hadoop and Eco-System. Summarize Tree Rooting. MR Overview/Implementation . Options. Hbase. . Overview/Implementation . Options. Giraph. Overview/Implementation Options. Section . 11.1. Trees. Definition. : A . tree. is a connected undirected graph with no simple circuits.. Example. : Which of these graphs are trees?. Parsimony analysis. Maximum likelihood. Bayesian inference. For all 3: Build an . unrooted. tree on one of these three criteria, ignore . synapomorphy. and . symplesiomorphy. , and pull root out on tree using . 12. Graphs and Trees 2. Summary. 1. . . 2. . 12. Graphs and Trees 2. Summary. . 3. . 10.5 Trees. Summary. Definition: Tree. A . graph. is said to be . circuit-free. if, and only if, it has no circuits.. Newick strings. Representing rooted trees using clades and rooted triplet trees. Constructing a rooted tree from its set of clades using Hasse Diagrams . Constructing a rooted tree from rooted triplet trees using Aho, Sagiv, Szymanski, and Ullman . Trees. Chapter 11 in . zybooks. trees. A . tree. is an undirected graph that is connected and . has no cycles. .. properties of trees. A . leaf. of an . unrooted. tree is a vertex of degree 1. . If a tree has only one vertex, then that vertex is a leaf. .