PPT-Differential Expression Analysis

Introduction to Systems Biology Course Chris Plaisier Institute for Systems Biology Glioma A Deadly Brain Cancer Wikimedia commons miRNAs in Cancer Caldas et al 2005 RISC Utility of miRNAs in Cancer. Nick Edwards, University of Glasgow. Nick Edwards. 1. Introduction. Want to measure differential cross sections in pT(Leading Z), pT(Leading Lepton), m(ZZ).. With 62 events we’re still pretty limited in statistics.. December . 2, 2014. 1. Required Reading. A firm foundation for private data analysis. . Dwork. , C. Communications of the ACM, 54(1), 86-95. . 2011.. Privacy by the Numbers: A New Approach to Safeguarding Data. Erica . limma. package. 20 March 2012. Functional Genomics. Linear regression. Fit a straight line through a set of points such that the distance from the points to the line is minimized. The slope of the line is adjusted to minimize the . Yotam. . Aron. Table of Contents. Introduction. Differential Privacy for Linked Data. SPIM implementation. Evaluation. Contributions. Theory: how to apply differential privacy to linked data.. Implementation: privacy module for SPARQL queries.. By: Kelly Martin. Differential Equation. Mathematical equation that relates some function with its derivatives. Usually, the functions represent physical quantities, the derivatives represent their rates of change, and the equation defines a relationship between those two. Outline. Single-Ended Versus Differential Operation. The transitions disturb. the differential by . equal amounts, leaving. the difference in tact.. Immunity to Supply Noise. If VDD changes by . ∆V, . Slope Fields. Differential Equations. Any equation involving a derivative is called a . differential equation. .. The solution to a differential is a family of curves that differ by a constant.. Example:. 2, 2014. 1. Required Reading. A firm foundation for private data analysis. . Dwork. , C. Communications of the ACM, 54(1), 86-95. . 2011.. Privacy by the Numbers: A New Approach to Safeguarding Data. Erica . A paper by: Paul Kocher, Joshua Jaffe, and Benjamin Jun. Presentation by: Michelle Dickson. Power Analysis. Introduction. Simple Power Analysis (SPA). Theory. Experimental Results. Prevention. Differential Power Analysis (DPA). Group. : Mohamed . Hairi. Bin Abdul . Shukur. (01DAD10F2060). . Khairil. . Azreen. Bin . Kholid. (01DAD10F2046). Amir Yusuf Bin . Hazimi. (01DAD10F2058). Muhammad . Amin. Jeremiah Blocki. CS-555. 11/22/2016. Credit: Some slides are from Adam Smith. Differential Privacy. Privacy . in . Statistical. . Databases. Individuals Se. r. v. er/agency. x. 1. x. 2. .. .. .. x. n. Syllabus. Winter 2018. Instructor and Textbook. Instructor: Roxin Zhang. Class: MWF 12:00 – 12:50 pm, . Jamrich. 3315. Office Hours: MWRT 11-11:50 am, . Jamrich. 2208. Text: A First Course in Differential Equations, 11th . What is measured by microarrays?. Microarray normalization. Differential gene expression (DE) analysis based on microarray data. Detection of outliers. RNAseq. data. DE analysis based on . RNAseq. data. RNA-Seq. G-OnRamp Beta Users Workshop. Wilson Leung. 07/2017. Outline. Design considerations for RNA-Seq experiments. Interpret FastQC results. Optimize alignment parameters for HISAT. Assess alignment statistics with CollectRnaSeqMetrics.