PPT-Preparing data for GWAS analysis

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Tommy Carstensen Wellcome Trust Advanced Courses Genomic Epidemiology in Africa 21 st 26 th June 2015 Africa Centre for Health and Population Studies University

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Preparing data for GWAS analysis: Transcript


Tommy Carstensen Wellcome Trust Advanced Courses Genomic Epidemiology in Africa 21 st 26 th June 2015 Africa Centre for Health and Population Studies University of KwaZuluNatal Durban South Africa. HapMap. Peter Castaldi. January 29, 2013. Objectives. Introduce the concept of linkage disequilibrium (LD). Describe how the . HapMap. project provides publically available information on genetic variation and LD structure. 6 December 2012. Introduction. I. mputation describes the process of predicting genotypes that have not been directly typed in a sample of individuals:. m. issing genotypes at typed variants;. genotypes at un-typed variants that are present in an external high-density “reference panel” of phased . . from. . the. ENIGMA–DTI Working Group. . Neda Jahanshad. 1#. , . Peter . Kochunov. 2#. , Emma Sprooten. 3,4. , René C. Mandl. 5. , Thomas E. Nichols. 6,7. , Laura Almasy. 8. , John Blangero. Southwest . Housing Compliance . Corporation. Presented . by: . Brad Kothmann. Director of Property Standards & . REAC Inspector. July 23, . 2015. Preparing for REAC Inspections: The Quick and Easy. Andrew Morris. Advanced Topics in GWAS. Toronto, 30 May 2012. Introduction. GWAS have been successful in detecting . novel loci for complex traits:. typically characterised by common variants of modest effect;. Parents . and Reading Committee. Prepared & Presented . by . Aretha Eldridge Williams. Preparing for Summer. As parents approach the summer break, many are thinking about the family vacation, trips to the pool, how to keep children engaged in activities at home, the abrupt changes to everyone's schedule—and how to juggle it all. What they might not be focusing on is how much educational ground their children could lose during the three-month break from school, particularly when it comes to reading.. IGSS 2015 Tutorial. Ben . Domingue. Gameplan. Overview. What are polygenic scores?. How are they used?. How are they created?. You create them.. Top hits. Homebrewed Genome-wide. PRSice. . Caveats, etc.. Jeff Barrett. What are the goals of disease genetics?. For a given disease, we would like to:. Predict if someone will get sick, how bad it will be, and what treatment will work.. Test hypotheses about relationships to other diseases and traits.. via . Mining . GWAS S. tatistics . Yue. Wang, . Xintao. Wu and . Xinghua Shi. College of Computing and Informatics, . University of North Carolina at Charlotte . Background. Data . privacy in genome-wide association studies (GWAS) is . Records Management and Declassification . Agency. AR 25-50, Preparing and Managing Correspondence. Correspondence management is governed by AR 25-50, Preparing and Managing Correspondence. . As proponent, RMDA prescribes (on behalf of Secretary of the Army) Department of the Army policies, procedures, and standardized formats for preparing and processing Army memorandums and letters.. Preparing the Garden Site Module 10 - Garden Ecology Lesson 5: Preparing the Garden Site Why is it important to prepare the site? More than likely the site you will be transforming will need some attention to get it ready for the makeover you are envisioning. . SYFTET. Göteborgs universitet ska skapa en modern, lättanvänd och . effektiv webbmiljö med fokus på användarnas förväntningar.. 1. ETT UNIVERSITET – EN GEMENSAM WEBB. Innehåll som är intressant för de prioriterade målgrupperna samlas på ett ställe till exempel:. Hardy-Weinberg equilibrium. Meta-analysis. SNP Imputation. Review what we have learned about the genetics of common disease from GWAS. Where do we go from here? What do we go with GWAS results.. functional characterization of GWAS loci. genetic variants. BMMB 551 Genomics. Ross . Hardison. 4/7/15. 1. Published. GWA Reports, 2005 . – 6/2012. Total . Number. of Publications. Calendar Quarter. Through . 6/30/12 postings. 1350. GWAS catalog interactive browser.

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