PPT-The role of pathogen genomics in COVID19 outbreak response

Alan Christoffels South African Medical Research Council Bioinformatics Unit South African National Bioinformatics Institute University of the Western Cape South Africa Secretariat Public Health Alliance for Genomic Epidemiology. T. h. e Specific Immune Response. OCR AS Biology – F212 – Module 2. Food & Health. Learning Objectives. Success Criteria. Understand the role of the specific immune system.. Understand the role of B and T Lymphocytes in fighting off pathogens.. analyze . your data with a mouse click. Igor Makunin. i.makunin@uq.edu.au. QAAFI, UQ, April 8, 2015. Research. Computing. Centre. @ UQ. Genomics Virtual Laboratory. Genome scale experiments are relatively cheap and very popular. Events Involving Public Health. Presented by. Captain Lynn . Slepski. . Transportation Public Health Incidents. Surveillance. Educated public. Engineered . controls. Coordinated response. International Standards. Kim Yi Dionne. Smith College. Challenges. No recorded previous outbreak (though there is evidence of previous exposure).. Outbreak across borders requires coordination across governments.. Intensity of Spread. selection, . regulation, epigenomics, . disease. Manolis Kellis. MIT Computer Science & Artificial Intelligence Laboratory. Broad Institute of MIT and Harvard. Goal: A systems-level understanding of genomes and gene regulation:. 11Medicare COVID19 Case A count of beneficiaries with a diagnosis of COVID19 on a claim or encounter record for We use the following International Classification of Diseases ICD Tenth Revision ICD10 d CHAPTER 338Worldwide Scientific Capacity for DevelopmentInadequate Governance Contributes to Failure of Diffusion ofGlobal Governance to Promote Global Public GoodsNeed for Global Governance for Genom Overview and Capabilities: . . High Throughput Sequencing Facility (HTSG). Functional Genomics M. ammalian Genotyping Core (MGC). Corbin Jones. Faculty Director. Piotr . Meiczkowski . Technologies . What is Structural Genomics ?. Is the process of high-. throughtput. determination of 3-D structures of Biological macromolecules. What is the Goal of Structural Genomics ?. Provision of enough structural templates to facilitate homology modeling of most proteins.. Kerrigan McCarthy. Consultant Pathologist. National Institute for Communicable Diseases. 25 June 2020. Source:. Will be on the NICD website from 26 June 2020 in the COVID-19 section. COVID-19 outbreaks in health care facilities . “. User facility. providing high-throughput DNA sequencing & analysis in support of DOE missions in alternative . energy. , . carbon cycling . & . bioremediation. .”. Opened in 1999. ~240 UC Employees. Regulatory. . Genomics. | Saurabh . Sinha. | 2020. 1. PowerPoint by Saba . Ghaffari. Edited by Shayan Tabe Bordbar. In this lab, we will do the following:. .. Use command line tools to manipulate a ChIP track for BIN TF in D. Mel.. GP session. Bron . McCrae. Deputy Director Healthy Living and Ageing. bmccrae@hnc.org.au. 0447 113 823 . First steps. Building a framework together. Working party . Agreed approaches. Standardising for an emergency . What . is . Functional. . Genomics?. RNA . Transcription/Gene. . Expression. Measuring Gene. . Expression. Microarrays. High-throughput. . Sequencing. Transcriptional. . Regulation. Transcription.