PPT-Figure 2 Figure 2. Pair-wise comparisons of genome alignments between 7 Haemophilus
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Strouts FR Power P Croucher NJ Corton N van Tonder A Quail MA et al Lineagespecific Virulence Determinants of Haemophilus influenzae Biogroup aegyptius Emerg Infect
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Figure 2 Figure 2. Pair-wise comparisons of genome alignments between 7 Haemophilus: Transcript
Strouts FR Power P Croucher NJ Corton N van Tonder A Quail MA et al Lineagespecific Virulence Determinants of Haemophilus influenzae Biogroup aegyptius Emerg Infect Dis 2012183449457 httpsdoiorg103201eid1803110728. Independent scientist. robert@drive5.com. www.drive5.com. Multiple . alingnment. and database search. Multiple alignment in 16S world. Curated. 16S multiple alignments:. RDP. SILVA. Greengenes. MSA methods for 16s:. McCormick DW, Molyneux EM. Bacterial Meningitis and Haemophilus influenzae Type b Conjugate Vaccine, Malawi. Emerg Infect Dis. 2011;17(4):688-690. https://doi.org/10.3201/eid1704.101045. Jackson ML, Rose CE, Cohn A, Coronado F, Clark TA, Wenger JD, et al. Modeling Insights into Haemophilus influenzae Type b Disease, Transmission, and Vaccine Programs. Emerg Infect Dis. 2012;18(1):13-20. https://doi.org/10.3201/eid1801.110336. Ramqvist T, Dalianis T. Oropharyngeal Cancer Epidemic and Human Papillomavirus. Emerg Infect Dis. 2010;16(11):1671-1677. https://doi.org/10.3201/eid1611.100452. Johnson NG, Ruggeberg JU, Balfour GF, Lee Y, Liddy H, Irving D, et al. Haemophilus influenzae Type b Reemergence after Combination Immunization. Emerg Infect Dis. 2006;12(6):937-941. https://doi.org/10.3201/eid1206.051451. Adeleke A, Pruckler J, Benson R, Rowbotham T, Halablab M, Fields B. Legionella-Like Amebal Pathogens––Phylogenetic Status and Possible Role in Respiratory Disease. Emerg Infect Dis. 1996;2(3):225-230. https://doi.org/10.3201/eid0203.960311. Campbell H, Amirthalingam G, Andrews N, Fry NK, George RC, Harrison T, et al. Accelerating Control of Pertussis in England and Wales. Emerg Infect Dis. 2012;18(1):38-47. https://doi.org/10.3201/eid1801.110784. Lepidi H, Fournier P, Raoult D. Histologic Features and Immunodetection of African Tick-bite Fever Eschar. Emerg Infect Dis. 2006;12(9):1332-1337. https://doi.org/10.3201/eid1209.051540. Marcus PI, Girshick T, van der Heide L, Sekellick MJ. Super-Sentinel Chickens and Detection of Low-Pathogenicity Influenza Virus. Emerg Infect Dis. 2007;13(10):1608-1610. https://doi.org/10.3201/eid1310.061552. Figure 9.01. PCR Detection of . Sequence Tagged Site. Mapping large genomes requires many . genetic markers. . Those based solely on their unique sequences are known as sequence tagged sites (STS). These unique sequences may be amplified by PCR and mapped relative to each other. In practice, each STS is defined by a pair of specific PCR primers at its ends that generate a PCR fragment of defined length.. Salzberg SL, Kingsford C, Cattoli G, Spiro DJ, Janies DA, Aly MM, et al. Genome Analysis Linking Recent European and African Influenza (H5N1) Viruses. Emerg Infect Dis. 2007;13(5):713. https://doi.org/10.3201/eid1305.070013. Hoffmann B, Scheuch M, Höper D, Jungblut R, Holsteg M, Schirrmeier H, et al. Novel Orthobunyavirus in Cattle, Europe, 2011. Emerg Infect Dis. 2012;18(3):469-472. https://doi.org/10.3201/eid1803.111905. Cerquetti M, degli Atti ML, Cardines R, Salmaso S, Renna G, Mastrantonio P. Invasive Type e Haemophilus influenzae Disease in Italy. Emerg Infect Dis. 2003;9(2):258-261. https://doi.org/10.3201/eid0902.020142. Ladhani SN, Collins S, Vickers A, Litt DJ, Crawford C, Ramsay ME, et al. Invasive Haemophilus influenzae Serotype e and f Disease, England and Wales. Emerg Infect Dis. 2012;18(5):725-732. https://doi.org/10.3201/eid1805.111738.
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