PPT-V7 – A nalyzing 3D chromatin conformation

Chromatin conformation has large implications on gene expression but is usually ignored in expression analysis Program for today 3D chromatin conformation HiC method Biases in HiC data analysis. California State Standards. Animal Science Pathway. D5.1 Evaluate a group of animals for desired qualities and discern among them for breeding selection. . Question of the Day:. What hybrid did we “create” in class yesterday?. Ethane Ethane staggered conformation H H H H H H H H H H H H 180 Anti Relationships Two bonds are anti when the angle between them is 180. H H H H H H H H H H H H 60 Gauche Relationships Two bonds are John M. Rosenfeld, Ph.D.. External Innovation Manager. EMD Millipore. Temecula, CA . Genomics & Pharmacogenomics 2015. Confidential and Property of EMD Millipore Corporation. Chromatin Biology has come a long way…. Alkanes. 240 . Chem. Chapter 2. 1. Hydrocarbons. 2. General Molecular Formula of Hydrocarbons. (Homologous Series) . 3. Carbon . Name . Molecular. Formula . Structural. Formula . 1. Methane . CH. 4. interactions. Exploring transcription factor binding and the . epigenomic. landscape. Lisa Stubbs. Eukaryotic genomes . are. complex structures comprised of modified and unmodified DNA, RNA and many types of interacting proteins. WHAT IS CONFORMATION? “ Conformation is the anatomy and skeletal function and how it impacts the animal’s health, adaptability, longevity, and productivity. “ Made up of Stru Daley & Daley:. Chapter 3. Molecular conformations. Conformations of Organic Molecules. 3.1 Alkane conformation. Staggered vs. eclipsed. Representations (2D & 3D). Energies. . 3.2 Cycloalkane conformations. Roland Jones, Dane . Brankle. , and Peter Stevenson. University of Utah. https://commons.wikimedia.org/wiki/File:A-B-Z-DNA_Side_View.png. Conformation of cyclic systems and illustration. Ansyln. , E.V.; Dougherty, D.A. . Trisilapentane. Frank E. . Marshall. a. , William Raymond Neal . Tonks. b. , David Joseph . Gillcrist. a. , Charles J. . Wurrey. c. , . Gamil. A. . Guirgis. b. , G. S. Grubbs . II. a. a. Missouri. University of Science and Technology. Click here to learn about the Navigation Tools.. Click here to skip Navigation Tools.. Created by Melissa Voigt. Navigation Tools. Home. Back. Primary Level. Tertiary Level. Secondary Level. Secondary or Tertiary Level. Hydrocarbon: . A compound composed only of carbon and hydrogen.. Saturated hydrocarbon: . A hydrocarbon containing only single bonds.. Alkane:. A saturated hydrocarbon whose carbons are arranged in a open chain.. Dr.. Karzan Mohammad. Chromatin. Eukaryotic DNA is closely associated with . proteins, . creating . chromatin. . Of two types:. Heterochromatin. Euchromatin. Chromatin. Euchromatin. Actively transcribed. Chromatin-binding factorshistone macromolecules that bind either directly or indirectly to DNA.Transcription factorhistone protein that directly binds to DNA.Architectural proteinsProteins that have a Genome in eukaryotes is large enough to be accommodated in tiny nucleus. It is required to achieve high degree of compaction for getting into the nucleus. Compaction is achieved by folding the DNA in