PPT-Fast and accurate short read alignment with Burrows–Wheel

transform Heng Li and Richard Durbin Members of this presentation Yunji Wang Sree Devineni Zhen Gao Motivation The first generation of hash tablebased methods eg MAQ are Slow. by . Mario Flores, . Xuepo. Ma, and. . Nguyen Nguyen. Outline. Short-read alignment. Algorithm. Results. Comparisons between short-read and long-read alignment. Long-read alignment. Algorithm. Results. Robin A. Ferracone, . CEO, RAF Capital. . LLC. Executive Chair, Farient Advisors . LLC. Fair Pay Fair Play:. Aligning Executive Performance and Pay. About RAF Capital and Farient Advisors. Holding company. Read Sequencing . Analysis. Jim Noonan. GENE 760. Sequence read lengths remain limiting. For most applications reads are . aligned. to a reference genome. Short reads contain inherently . limited information. Computations . to GPUs. Graphics processors (GPUs) and other . “wide SIMD” multiprocessors . are becoming . a dominant force in high-performance computing.. How do we effectively use them for . streaming applications . - The earliest forms of the potter's wheel were . tournettes. ,. or slow wheels.. - . Tournettes. , in use around 3,500 BC in the Near East, were turned slowly by hand or . by foot while coiling a pot. . James Knight. (with many slides adapted from Jim Noonan). GENE 760. R. ule to remember when. using bioinformatics . t. ools. Computer scientists and mathematicians/statisticians make simplifications to speed up computations or to create a robust statistical model. Jim Noonan. GENE 760. Sequence read lengths remain limiting. For most applications reads are . aligned. to a reference genome. Short reads contain inherently limited information. De novo . assembly of short reads is difficult. Independent scientist. robert@drive5.com. www.drive5.com. Multiple . alingnment. and database search. Multiple alignment in 16S world. Curated. 16S multiple alignments:. RDP. SILVA. Greengenes. MSA methods for 16s:. - The earliest forms of the potter's wheel were . tournettes. ,. or slow wheels.. - . Tournettes. , in use around 3,500 BC in the Near East, were turned slowly by hand or . by foot while coiling a pot. . Begin by placing your car in a level area of your shop with the suspension set up so that it is sitting at ride height. You also need to have mounted up a set of relative new tires on unbent rims..  Tie a length of string a few feet longer than the wheelbase of your car to two jackstands. Technically, what you tie your string to doesn’t have to be a jackstand, but they are the best height and weight and extras are almost always lying around in every race shop. Whatever you use, just make sure they are stable, heavy enough to keep good tension on the string yet light enough to move around relatively easily.. Ted . Ginnity. , . Hella. Kaleb Silver, Hunter. Craig Smith, Rapid7. Joshua Stone, Honda. Moderator - Robert Vogt, IOSiX. Overview of ADAS Systems. Video – Overview (. Hella. confidential). This . APPLICATION Specialized for high precision printing on centerregistering tablet glassTAIWANCERTIFIEDCERTIFIEDNATIONALAWARDNATIONALAWARDNATIONALINNOVATIONRESEARCH AWARDSILVER NATIONALAWARDNATIONALQUAL 2tzlistAuthorAndyTeucherautcrexhttpxs//xorcixdorg/0000-0002-7840-692XBobRudisctbxhttpxs//xorcixdorg/0000-0001-5670-2640MaintainerAndyTeucherxandyxteuxcherxgmaxilcxom00RepositoryCRANDate/Publication201 Simulation for Personalized Photodynamic Cancer Therapy Treatment Planning. Investigators: Vaughn Betz, . University of Toronto. Lothar. . Lilge. , University Health . Network. Partner Organizations: IBM and .