PPT-Figure Figure. Maximum likelihood phylogenetic tree of hantaviruses showing the

Author : davis | Published Date : 2024-06-10

Klempa B FichetCalvet E Lecompte E Auste B Aniskin V Meisel H et al Hantavirus in African Wood Mouse Guinea Emerg Infect Dis 2006125838840 httpsdoiorg103201eid1205051487

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Figure Figure. Maximum likelihood phylogenetic tree of hantaviruses showing the: Transcript

Klempa B FichetCalvet E Lecompte E Auste B Aniskin V Meisel H et al Hantavirus in African Wood Mouse Guinea Emerg Infect Dis 2006125838840 httpsdoiorg103201eid1205051487. See Davison Ch. 4 for background and a more thorough discussion.. Sometimes. See last slide for copyright information. Maximum Likelihood. Sometimes. Close your eyes and differentiate?. Simulate Some Data: True α=2, β=3. Sometimes. See last slide for copyright information. Maximum Likelihood. Sometimes. Close your eyes and differentiate?. Simulate Some Data: True α=2, β=3. Alternatives for getting the data into D might be. Dr Laura Emery . Laura.Emery@ebi.ac.uk. www.ebi.ac.uk. Objectives. After this . tutorial you . should be able to. …. Discuss . a range of . methods for . phylogenetic . inference, their advantages. Sobolev I, Sharshov K, Dubovitskiy N, Kurskaya O, Alekseev A, Leonov S, et al. Highly Pathogenic Avian Influenza A(H5N8) Virus Clade 2.3.4.4b, Western Siberia, Russia, 2020. Emerg Infect Dis. 2021;27(8):2224-2227. https://doi.org/10.3201/eid2708.204969. Stockton J, Stephenson I, Fleming D, Zambon M. Human Metapneumovirus as a Cause of Community-Acquired Respiratory Illness. Emerg Infect Dis. 2002;8(9):897-901. https://doi.org/10.3201/eid0809.020084. Watanabe S, Maeda K, Suzuki K, Ueda N, Iha K, Taniguchi S, et al. Novel Betaherpesvirus in Bats. Emerg Infect Dis. 2010;16(6):986-988. https://doi.org/10.3201/eid1606.091567. Monroe MC, Morzunov SP, Johnson AM, Bowen MD, Artsob H, Yates T, et al. Genetic Diversity and Distribution of Peromyscus-Borne Hantaviruses in North America. Emerg Infect Dis. 1999;5(1):75-86. https://doi.org/10.3201/eid0501.990109. Bellini WJ, Rota PA. Genetic Diversity of Wild-Type Measles Viruses: Implications for Global Measles Elimination Programs. Emerg Infect Dis. 1998;4(1):29-34. https://doi.org/10.3201/eid0401.980105. Bessaud M, Peyrefitte CN, Pastorino BA, Tock F, Merle O, Colpart J, et al. Chikungunya Virus Strains, Reunion Island Outbreak. Emerg Infect Dis. 2006;12(10):1604-1605. https://doi.org/10.3201/eid1210.060596. Daniel Money And Simon Whelan. ~Anusha . Sura. What is this?. A phylogenetic tree or evolutionary tree is a branching diagram or "tree" showing the inferred evolutionary relationships among various biological species or other entities.. Avellón A, Casas I, Trallero G, Pérez C, Tenorio A, Palacios G. Molecular Analysis of Echovirus 13 Isolates and Aseptic Meningitis, Spain. Emerg Infect Dis. 2003;9(8):934-941. https://doi.org/10.3201/eid0908.030080. Keawcharoen J, Oraveerakul K, Kuiken T, Fouchier R, Amonsin A, Payungporn S, et al. Avian Influenza H5N1 in Tigers and Leopards. Emerg Infect Dis. 2004;10(12):2189-2191. https://doi.org/10.3201/eid1012.040759. Salzberg SL, Kingsford C, Cattoli G, Spiro DJ, Janies DA, Aly MM, et al. Genome Analysis Linking Recent European and African Influenza (H5N1) Viruses. Emerg Infect Dis. 2007;13(5):713. https://doi.org/10.3201/eid1305.070013. Markey PG, Davis JS, Harnett GB, Williams SH, Speers DJ. Meningitis and a Febrile Vomiting illness Caused by Echovirus Type 4, Northern Territory, Australia. Emerg Infect Dis. 2010;16(1):63-68. https://doi.org/10.3201/eid1601.081519.

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Maximum Likelihood See Davison Ch. 4 for background and a more thorough discussion.

Part two An Introduction to Phylogenetic Methods

PPT-Figure Figure. Maximum likelihood phylogenetic tree of hantaviruses showing the

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Figure Figure. Maximum likelihood phylogenetic tree of hantaviruses showing the: Transcript

Maximum Likelihood See Davison Ch. 4 for background and a more thorough discussion.

Part two An Introduction to Phylogenetic Methods

Figure Figure. Maximum-likelihood phylogenetic tree of the hemagglutinin segment of HPAI

Figure 2 Figure 2. Phylogenetic tree showing sequence analysis of human Metapneumovirus

Figure Figure. Phylogenetic tree based on the deduced amino acid sequences of

Figure 1 Figure 1. Overall hantavirus phylogenetic tree based on analysis of

Figure 2 Figure 2. Phylogenetic tree showing genetic relationships between the

Figure Figure. Phylogenetic tree of chikungunya virus (CHIKV) based on partial

Characterizing the Phylogenetic Tree-Search Problem

Figure 2 Figure 2. Phylogenetic tree of the VP1 3′ terminal region, which identifies

Figure 2 Figure 2. Phylogenetic comparison of zoo felid isolates with other H5N1

Figure 1 Figure 1. Phylogenetic tree of hemagglutinin (HA) segments from 36 avian

Figure 3 Figure 3. Phylogenetic tree of viral protein (VP) 1 gene sequences showing

PPT-Figure Figure.&nbsp;Maximum likelihood phylogenetic tree of hantaviruses showing the

Presentation Embed Code

Download Presentation

Figure Figure.&nbsp;Maximum likelihood phylogenetic tree of hantaviruses showing the: Transcript

Maximum Likelihood See Davison Ch. 4 for background and a more thorough discussion.

Part two An Introduction to Phylogenetic Methods

Figure Figure. Maximum-likelihood phylogenetic tree of the hemagglutinin segment of HPAI

Figure 2 Figure 2.&nbsp;Phylogenetic tree showing sequence analysis of human Metapneumovirus

Figure Figure.&nbsp;Phylogenetic tree based on the deduced amino acid sequences of

Figure 1 Figure 1.&nbsp;Overall hantavirus phylogenetic tree based on analysis of

Figure 2 Figure 2.&nbsp;Phylogenetic tree showing genetic relationships between the

Figure Figure.&nbsp;Phylogenetic tree of chikungunya virus (CHIKV) based on partial

Characterizing the Phylogenetic Tree-Search Problem

Figure 2 Figure 2.&nbsp;Phylogenetic tree of the VP1 3′ terminal region, which identifies

Figure 2 Figure 2.&nbsp;Phylogenetic comparison of zoo felid isolates with other H5N1

Figure 1 Figure 1.&nbsp;Phylogenetic tree of hemagglutinin (HA) segments from 36 avian

Figure 3 Figure 3.&nbsp;Phylogenetic tree of viral protein (VP) 1 gene sequences showing

PPT-Figure Figure. Maximum likelihood phylogenetic tree of hantaviruses showing the

Figure Figure. Maximum likelihood phylogenetic tree of hantaviruses showing the: Transcript

Figure 2 Figure 2. Phylogenetic tree showing sequence analysis of human Metapneumovirus

Figure Figure. Phylogenetic tree based on the deduced amino acid sequences of

Figure 1 Figure 1. Overall hantavirus phylogenetic tree based on analysis of

Figure 2 Figure 2. Phylogenetic tree showing genetic relationships between the

Figure Figure. Phylogenetic tree of chikungunya virus (CHIKV) based on partial

Figure 2 Figure 2. Phylogenetic tree of the VP1 3′ terminal region, which identifies

Figure 2 Figure 2. Phylogenetic comparison of zoo felid isolates with other H5N1

Figure 1 Figure 1. Phylogenetic tree of hemagglutinin (HA) segments from 36 avian

Figure 3 Figure 3. Phylogenetic tree of viral protein (VP) 1 gene sequences showing