PPT-Run BLAST in command line mode

Yanbin Yin Fall 2014 1 http wwwncbinlmnihgov booksNBK52640 2 Why you do need to run BLAST in command line terminal NCBIs server does not have a database that you want to search. Commands for Entering Input mode Insert before cursor Insert after cursor Insert at the beginning of line Insert at the end of line movement command Change text of a movement command movement command see below Change text to the end of line equivale 1. Chapter 11. Configuring and Testing Your Network . CCNA Exploration. Network Fundamentals. Ch 11 - . 2. Objectives. Define the role of the Internetworking Operating System (IOS) . Define the purpose of a configuration file . FIPS. 140-2 compliance. Unity Connection 8.6. Mike Canfield- Test engineer. Yolanda Liu – Dev engineer. What is . FIPS. 140-2. Federal Information Processing Standards Publication 140-2 . Security requirements for Cryptographic Modules. University of Mississippi. Vi Editor. What is Vi . ?. Vi is a screen based editor.. The screen of your terminal will act as a window into the file you are editing.. Most commands to Vi move the cursor around the file. softwares. Yanbin Yin. Fall 2014. 1. Homework #8. Create a folder under your home called hw8. Change directory to hw8. Copy the . faa. file and . ptt. file you’ve downloaded from NCBI ftp site in hw7 to hw8 folder. Khaled. A. Al-. Utaibi. alutaibi@uoh.edu.sa. Agenda. Interrupts in Microcomputer Systems. Programmable Interrupt Controllers. General Description of the 8259A. Pin Configuration of the 8259A. Block Diagram of the 8259A. T. A. Herring R. W. King M. A. Floyd. Massachusetts Institute of Technology. GPS Data Processing and Analysis with GAMIT/GLOBK/TRACK. UNAVCO . Headquarters. , Boulder, Colorado. 10–14 August 2015. Chapter . 16. Deciphering the Command Line interface. Shells. Accessing the Command-Line Interface. cmd. Accessing the Command-Line Interface in Mac OS X and Linux. terminal. The Command Prompt. C:\> username:/home. Vi . IMproved. What is vim?. Text editor.. Based off older editor; vi.. Very efficient.. Open source.. Available for UNIX based distros, MAC, Windows, and others.. Starting vim. In a terminal session, enter: . Yanbin Yin. Fall 2014. 1. http://. www.ncbi.nlm.nih.gov. /books/NBK52640/. 2. Why you do need to run BLAST in command line terminal?. NCBI’s server does not have a database that you want to search. CSCI 3385K. Operating System. Operating System. All end devices and network devices require an operating system (OS).. Kernel is the portion of the OS that interacts directly with the computer hardware.. ~ For the . Inquisitive . Mac Sysadmin ~. Part I of ??. Who is this guy?. Sr. Application Developer @ The Wharton School, UPENN. Run, with an excellent team, a Linux (RHEL) HPC research cluster. Much of my job entails scripting (bash, . Permissions. Prepared by Dr. Reyes, New York City College of Technology. Ownership. Files permissions are divided in three levels: owner, group, everybody. ls. -l. id -. command used to find out information about your identity. Readings: Chapter 15. sed. Stream Editor (sed) . A batch editor. Transforms input stream from a file or standard input. Frequently used as filter in a pipe. sed can test, branch, substitute, hold, and exchange data.