PPT-BLAST@NCBI 組員 : 林哲賢 謝友恆 李沂芳 黃堂榮 林資皓

Outline A brief introduction on various kind of BLAST Different Sequences introduction of NCBI and FASTA format Web version BLAST BLAST on Linux system An application of BLAST on Bioengineering. Basic Local Alignment Search Tool. (Altschul et al. 1990. ). What is blast. ?. BLAST .  DNA/protein databases. GOOGLE  internet. . D. Fristrom, Boston U. .. Uses for Blast. . Identifying unknown sequence. Surg Cdr Jane Risdall . Royal Navy. Consultant. . Neuroanaesthetist/Intensivist. Senior Lecturer, Academic Dept Military . Anaesthesia. and Critical Care. Visiting Research Fellow, University of Cambridge. Yanbin Yin. Fall 2014. 1. http://. www.ncbi.nlm.nih.gov. /books/NBK52640/. 2. Why you do need to run BLAST in command line terminal?. NCBI’s server does not have a database that you want to search. Drosophila. An introduction to web tools, databases and NCBI BLAST. Wilson Leung . 08/2016. Agenda. GEP annotation project overview. Web databases for . Drosophila. annotation. UCSC Genome Browser. Guidance on post-blast fumes and what steps to take to avoid exposure to them. . Drilling and Blasting. Toolbox Talk : 16. Target Audience. All those involved in the blasting operation – especially the post-blast inspection process.. Yanbin Yin. Fall 2014. 1. http://. www.ncbi.nlm.nih.gov. /books/NBK52640/. 2. Why you do need to run BLAST in command line terminal?. NCBI’s server does not have a database that you want to search. Recap : . Pairwise. sequence alignment. Grouping of two sequences to maximize similarity/identity using a scoring system (substitution matrices):. PAM (1,120,250). BLOSUM (80,62,45). Optimal alignment algorithms:. Service Learning. involves . students in community service activities and applies the experience to personal and academic development. . Benefits of . S. ervice Learning. Connect academic subjects to the real word . PGY-3 Talk. June 22, 2016. Agenda. Overview & Incidence. Triage. Patterns of Injury. Most Common Injuries: Lung, Head, Ear, and Soft Tissue. Case Questions. The Number and Lethality of Terrorist Attacks Has Been Rising Since the Late 90s. NCBI Sequence Taxonomy & BLAST Searching. Updated: June 2021. Content is made available under the Creative Commons Attribution-. NonCommercial. -No Derivatives International License. Contact (. wolbachiaproject@vanderbilt.edu. An introduction to web tools, . databases, and NCBI BLAST. Wilson Leung 12/2021. Agenda. GEP annotation project overview. Web databases for . Drosophila. annotation. UCSC Genome Browser. NCBI / BLAST. online and offline. Wen-Dar Lin. Bioinformatics core, IPMB. wdlin@gate.sinica.edu.tw. Preface. When we are talking about . sequence similarity. , we usually are talking about . local alignments. .. NCBI BLAST is one of the most famous local alignment programs where almost everyone has ever used it.. Team2. 邱冠儒 黃. 尹. 柔 田. 耕. 豪 蕭. 逸. 嫻 謝朝茂 . 莊閔. 傑. 2014/05/12. 1. BLAST. Basic local alignment search tool. Enable to compare query sequence of amino-acid or protein or DNA to database . Arya L, Rathinam SR, Lalitha P, Kim UR, Ghatani S, Tandon V. Trematode Fluke Procerovum varium as Cause of Ocular Inflammation in Children, South India. Emerg Infect Dis. 2016;22(2):192-200. https://doi.org/10.3201/eid2202.150051.