PPT-Community Phylogenetic structure with R

Central question in community ecology What processes are responsible for the identity and relative abundances of cooccurring species in local assemblages What is the relative importance of different ecological processes in structuring communities. Losos Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology Harvard University 26 Oxford Street Cambridge MA 02138 USA Correspondence Email jlososoebharvardedu Abstract Ecologists are increasingly adopting an evolutiona by Optimizing Community Quality Metrics. Mingming. Chen. Department of Computer Science. Rensselaer . Polytechnic . Institute. 09/28/2015. Community Structure. Community is the basic structure in many networks. Jure Leskovec, CMU. Kevin Lang, Anirban Dasgupta and Michael Mahoney. Yahoo! Research. Network communities. Communities:. Sets of nodes with . lots. of connections . inside. and . few . to . outside. Jure Leskovec, CMU. Kevin Lang, Anirban Dasgupta, Michael Mahoney. Yahoo! Research. Networks. Big data. Study emerging behaviors. How are small networks different from large. 2. Network community structure. Jure Leskovec, CMU. Kevin Lang, Anirban Dasgupta and Michael Mahoney. Yahoo! Research. Network communities. Communities:. Sets of nodes with . lots. of connections . inside. and . few . to . outside. Haeckel’s evolutionary trees are among the first attempts at phylogeny inference.. Darwin’s tree. Schools of thought. A. Evolutionary Taxonomy. The basic view was that the best way to reconstruct the phylogeny of a group is to spend a lifetime learning everything one can about the biology of the group.. Kim . Gernert. Emory University, Atlanta, GA. Vedham. . Karpakakunjaram. Montgomery College, Rockville, MD. Target Audience. Students enrolled in Principles of Biology I (BI 107) and II (BI 108). Human salivary amylase: used in one of our lab modules, so students are familiar with this enzyme and its function. Dr Laura Emery . Laura.Emery@ebi.ac.uk. www.ebi.ac.uk. Objectives. After this . tutorial you . should be able to. …. Discuss . the impact of a range of biological phenomena upon phylogenetic . inference. 69 brought to you by CORE View metadata, citation and similar papers at core.ac.uk B. BRUVO-MAĐARIĆ: Molekularne �logenetske metode u entomologiji – nove spoznaje u evolucijskim odnosi Takada N, Fujita H, Kawabata H, Takajo I, Sakata A, Takano A, et al. Spotted Fever Group Rickettsia sp. Closely Related to R. japonica, Thailand. Emerg Infect Dis. 2009;15(4):610-611. https://doi.org/10.3201/eid1504.071271. Sushmita Roy. sroy@biostat.wisc.edu. Computational Network Biology. Biostatistics & Medical Informatics 826. https://compnetbiocourse.discovery.wisc.edu. Nov 1. st. 2018. Goals for today. Finding modules on graphs/Community structure on graphs/Graph clustering. Tandy Warnow. Department of Computer Science. The Computational Historical Linguistics Project. http://. tandy.cs.illinois.edu. /. histling.html. Collaboration with Don . Ringe. began. in 1994; 17 papers since then, and two . Smits SL, Zijlstra E, van Hellemond JJ, Schapendonk C, Bodewes R, Schürch AC, et al. Novel Cyclovirus in Human Cerebrospinal Fluid, Malawi, 2010–2011. Emerg Infect Dis. 2013;19(9):1511-1513. https://doi.org/10.3201/eid1909.130404. Terminology. phylogeny . evolutionary history of a species or group of species. systematics. . classifying and determining evolutionary relationships of organisms . taxonomy . classifying and naming of organisms.