PPT-Lecture 2 - The History of Phylogenetic Inference

Author : test | Published Date : 2018-02-18

Haeckels evolutionary trees are among the first attempts at phylogeny inference Darwins tree Schools of thought A Evolutionary Taxonomy The basic view was that the

Presentation Embed Code

Download Presentation

Download Presentation The PPT/PDF document "Lecture 2 - The History of Phylogenetic ..." is the property of its rightful owner. Permission is granted to download and print the materials on this website for personal, non-commercial use only, and to display it on your personal computer provided you do not modify the materials and that you retain all copyright notices contained in the materials. By downloading content from our website, you accept the terms of this agreement.

Lecture 2 - The History of Phylogenetic Inference: Transcript

Haeckels evolutionary trees are among the first attempts at phylogeny inference Darwins tree Schools of thought A Evolutionary Taxonomy The basic view was that the best way to reconstruct the phylogeny of a group is to spend a lifetime learning everything one can about the biology of the group. Losos Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology Harvard University 26 Oxford Street Cambridge MA 02138 USA Correspondence Email jlososoebharvardedu Abstract Ecologists are increasingly adopting an evolutiona . A School Leader’s Guide for Improvement. 1. Georgia Department of Education . Dr. John D. Barge, State School Superintendent . All Rights Reserved. The Purpose of this Module is to…. p. rovide school leaders an opportunity to strengthen their understanding of low inference feedback.. Chris . Mathys. Wellcome Trust Centre for Neuroimaging. UCL. SPM Course (M/EEG). London, May 14, 2013. Thanks to Jean . Daunizeau. and . Jérémie. . Mattout. for previous versions of this talk. A spectacular piece of information. Central question in community ecology. What processes are responsible for the identity and relative abundances of co-occurring species in local assemblages?. What is the relative importance of different ecological processes in structuring communities. . CRF Inference Problem. CRF over variables: . CRF distribution:. MAP inference:. MPM (maximum posterior . marginals. ) inference:. Other notation. Unnormalized. distribution. Variational. distribution. Chris . Mathys. Wellcome Trust Centre for Neuroimaging. UCL. SPM Course. London, May 11, 2015. Thanks to Jean . Daunizeau. and . Jérémie. . Mattout. for previous versions of this talk. A spectacular piece of information. Susan Athey, Stanford GSB. Based on joint work with Guido Imbens, Stefan Wager. References outside CS literature. Imbens and Rubin Causal Inference book (2015): synthesis of literature prior to big data/ML. Warm up. Share your picture with the people at your table group.. Make sure you have your Science notebook, agenda and a sharpened pencil. use tape to put it in front of your table of contents. Describe the difference between observations and inferences. Chapter . 2 . Introduction to probability. Please send errata to s.prince@cs.ucl.ac.uk. Random variables. A random variable . x. denotes a quantity that is uncertain. May be result of experiment (flipping a coin) or a real world measurements (measuring temperature). Phylogenetic trees. Common Ancestry. Be able to. 1.14 Pose scientific questions that identify essential properties of shared, core life processes that provide insights into the history of life on Earth.. Dr Laura Emery . Laura.Emery@ebi.ac.uk. www.ebi.ac.uk. Objectives. After this . tutorial you . should be able to. …. Discuss . the impact of a range of biological phenomena upon phylogenetic . inference. Jasmin . sutkovic. What are those?. Phylogenetic trees . represent . the evolutionary relationships among a set of organisms or groups of . organisms. These organisms are c. alled. . taxa (singular: taxon) that are believed to have a common ancestor. Smits SL, Zijlstra E, van Hellemond JJ, Schapendonk C, Bodewes R, Schürch AC, et al. Novel Cyclovirus in Human Cerebrospinal Fluid, Malawi, 2010–2011. Emerg Infect Dis. 2013;19(9):1511-1513. https://doi.org/10.3201/eid1909.130404. Guan D, Li W, Su J, Fang L, Takeda N, Wakita T, et al. Asian Musk Shrew as a Reservoir of Rat Hepatitis E Virus, China. Emerg Infect Dis. 2013;19(8):1341-1343. https://doi.org/10.3201/eid1908.130069.

Download Document

Here is the link to download the presentation.
"Lecture 2 - The History of Phylogenetic Inference"The content belongs to its owner. You may download and print it for personal use, without modification, and keep all copyright notices. By downloading, you agree to these terms.