PPT-Molecular Evolution and Phylogenetic Tree Reconstruction
Author : phoebe-click | Published Date : 2017-05-27
1 4 3 2 5 1 4 2 3 5 Phylogenetic Trees Nodes species Edges time of independent evolution Edge length represents evolution time AKA genetic distance Not necessarily
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Molecular Evolution and Phylogenetic Tree Reconstruction: Transcript
1 4 3 2 5 1 4 2 3 5 Phylogenetic Trees Nodes species Edges time of independent evolution Edge length represents evolution time AKA genetic distance Not necessarily chronological time. Methods and applications. Divya. B.. PK. lab, . CES. , . IISc. Quantifying species diversity. Captures evolutionary history. Uses molecular data – DNA sequence. Workshop on Molecular Phylogenetics 2014, IISc. Tandy Warnow. The Department of Computer Science. The University of Texas at Austin. Metagenomic. . Taxon. . Identification. Objective: classify short reads in a metagenomic sample. 1. . What. is . Spring 2011. Constantinos (. Costis. ) Daskalakis. costis@mit.edu. lecture . 19. the evolutionary process. the “tree of life”. ACCGT…. AACGT…. ACGGT…. ACTGT…. TCGGT…. ACTGT…. ACCGT…. Represent traits that are either derived or lost due to evolution . definitions. evolutionary history of a species or group of species. discipline focused on classifying organisms & determining their evolutionary relationships. Methods. Dr Laura Emery . Laura.Emery@ebi.ac.uk. www.ebi.ac.uk. /training. Objectives. After this . tutorial you . should be able to. …. Discuss . a range of . methods for . phylogenetic . inference, their advantages. Dr Laura Emery . Laura.Emery@ebi.ac.uk. www.ebi.ac.uk. Objectives. After this . tutorial you . should be able to. …. Discuss . the impact of a range of biological phenomena upon phylogenetic . inference. Watanabe S, Maeda K, Suzuki K, Ueda N, Iha K, Taniguchi S, et al. Novel Betaherpesvirus in Bats. Emerg Infect Dis. 2010;16(6):986-988. https://doi.org/10.3201/eid1606.091567. Silling S, Wieland U, Werner M, Pfister H, Potthoff A, Kreuter A. Resolution of Novel Human Papillomavirus–induced Warts after HPV Vaccination. Emerg Infect Dis. 2014;20(1):142-145. https://doi.org/10.3201/eid2001.130999. Nielsen SC, Mourier T, Baandrup U, Søland T, Bertelsen M, Gilbert M, et al. Probable Transmission of Coxsackie B3 Virus from Human to Chimpanzee, Denmark. Emerg Infect Dis. 2012;18(7):1163-1165. https://doi.org/10.3201/eid1807.111689. Takada N, Fujita H, Kawabata H, Takajo I, Sakata A, Takano A, et al. Spotted Fever Group Rickettsia sp. Closely Related to R. japonica, Thailand. Emerg Infect Dis. 2009;15(4):610-611. https://doi.org/10.3201/eid1504.071271. Daniel Money And Simon Whelan. ~Anusha . Sura. What is this?. A phylogenetic tree or evolutionary tree is a branching diagram or "tree" showing the inferred evolutionary relationships among various biological species or other entities.. Jasmin . sutkovic. What are those?. Phylogenetic trees . represent . the evolutionary relationships among a set of organisms or groups of . organisms. These organisms are c. alled. . taxa (singular: taxon) that are believed to have a common ancestor. Smits SL, Zijlstra E, van Hellemond JJ, Schapendonk C, Bodewes R, Schürch AC, et al. Novel Cyclovirus in Human Cerebrospinal Fluid, Malawi, 2010–2011. Emerg Infect Dis. 2013;19(9):1511-1513. https://doi.org/10.3201/eid1909.130404. Terminology. phylogeny . evolutionary history of a species or group of species. systematics. . classifying and determining evolutionary relationships of organisms . taxonomy . classifying and naming of organisms.
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