PPT-Analysis of ChIP-Seq Data

Author : tatyana-admore | Published Date : 2016-08-03

Biological Sequence Analysis BNFO 691602 Spring 2014 Mark Reimers Analysis of ChIPSeq Data Genomic Data Analysis Course Moscow July 2013 Mark Reimers PhD What

Presentation Embed Code

Download Presentation

Download Presentation The PPT/PDF document "Analysis of ChIP-Seq Data" is the property of its rightful owner. Permission is granted to download and print the materials on this website for personal, non-commercial use only, and to display it on your personal computer provided you do not modify the materials and that you retain all copyright notices contained in the materials. By downloading content from our website, you accept the terms of this agreement.

Analysis of ChIP-Seq Data: Transcript

Biological Sequence Analysis BNFO 691602 Spring 2014 Mark Reimers Analysis of ChIPSeq Data Genomic Data Analysis Course Moscow July 2013 Mark Reimers PhD What Are the Questions Where are histone modifications. Biological Sequence Analysis. BNFO 691/602 Spring . 2014. Mark Reimers. Analysis of ChIP-Seq Data. Genomic Data Analysis Course. Moscow July 2013. Mark Reimers, . Ph.D. What Are the Questions?. Where are histone modifications?. . Data . Analysis. Release DNA. Immunoprecipitate. Sequence. Map sequence tags to genome. & identify peaks. ChIP-. seq. overview. Adapted from slide set by: Stuart M. Brown, Ph.D., . Center for Health Informatics & Bioinformatics, NYU School of Medicine. Jenny . Wu. Outline. Goals : Practical guide to NGS data processing. Bioinformatics in NGS data analysis. Basics: terminology, data formats, general workflow etc.. Data Analysis Pipeline. Sequence QC and preprocessing. * Arizona is in process of phasing out its separate CHIP program and is not enrolling new children in CHIP.. Medicaid Expansion States (14 states & Arizona). Low-Risk States with Wide Band of Separate CHIP . . Haim. , . Ya'akov. Gal, . Sarit. Kraus and Michele J. . Gelfand. A Cultural Sensitive Agent for Human-Computer. Negotiation . 1. Motivation. Buyers and seller across geographical and ethnic borders. . OMEGA . microelectronics group . Ecole. Polytechnique CNRS/IN2P3 , Palaiseau (France). OMEGA, . 19/03/2014. 3. rd. generation chip for ILD. Independent channels (zero suppress). I2C link (@IPNL. James C. Fleet, PhD. Distinguished Professor. Department of Nutrition Science. Pete Pascuzzi, PhD. Assistant Professor. Purdue Libraries. Day . 5. Session 30: . DNA-. seq. Applications. James C. Fleet, PhD. & . Serializer. Requirements. JC Wang. June 6, 2013. Outline. Data processing:. UT common mode suppression algorithm.. Number of ADC bits in zero suppressed signal.. Serializer. block:. Event packet format at the front end ASIC.. and RNA-. seq. Vladimir Teif. Intro to NGS analysis. Proficio. course 2020. NGS data integration. http://determinedtosee.com/wp-content/uploads/2014/08/jigsaw-puzzle.jpg. 1. Signal + existing annotation. simon.andrews@babraham.ac.uk. @. simon_andrews. v2022-02. What this course covers. The theory of . ChIP-Seq. ChIP-Seq. library properties. Sequencing, Data processing and QC. Data visualisation and exploration. Vladimir Teif. Intro to NGS analysis. Proficio. course 2020. NGS techniques vs. NGS applications. NGS techniques. : . how. to sequence DNA (or RNA). (covered in lecture 1; funny recap in this video. Vladimir Teif. BS312 – Genome Bioinformatics. Lecture 5. Next generation sequencing analysis. https://micro.magnet.fsu.edu/cells/nucleus/images/chromatinstructurefigure1.jpg. Chromatin basics -- reminder. Jean . Shimer. . and Patti . Fougere. , MA Part C. Karen Walker, WA Part . C. Karie. Taylor, AZ Part C. Abby . Winer, . DaSy. , ECTA. Tony Ruggiero, . DaSy. , . IDC. 2014 Improving Data, Improving Outcomes Conference. 1. Marcello Bindi,. . on behalf of the Off-detector Working group. Outline. Read out system overview. Calibration and data taking requirements. System tests of the different labs . Achieved results at CERN: .

Download Document

Here is the link to download the presentation.
"Analysis of ChIP-Seq Data"The content belongs to its owner. You may download and print it for personal use, without modification, and keep all copyright notices. By downloading, you agree to these terms.