PPT-Annotation of Drosophila

Last Updated 12262021 Wilson Leung and Chris Shaffer Agenda Overview of the GEP annotation project GEP annotation strategy Types of evidence Analysis tools Web databases Annotation of a single isoform walkthrough. Thesis Proposal. Tao Huang. taohuang@cs.indiana.edu. Outline. Introduction. Motivation. Related System Survey. Research Issues. Milestones. Contributions. Introduction. Annotation Definitions. A commentary on an object that: (Cousins et al. 2000). PropBank. . Outline. Introduction to the project. Basic linguistic concepts. Verb & Argument. Making information explicit. Null arguments. Tasks to be carried out. Timesheets, tips. Creation of Resources. Drosophila. 06/2016. Wilson Leung. Outline. Transcription start . s. ites (TSS) annotation goals. Promoter architecture in . D. melanogaster. Find the initial transcribed exon. Annotate putative transcription start sites. A Close Reading Strategy for Better Comprehension. Text Annotation by Teachers. What is Text Annotation?. While reading, students mark the pages for . Important information. Text meaning or key details. Drosophila. An introduction to web tools, databases and NCBI BLAST. Wilson Leung . 08/2016. Agenda. GEP annotation project overview. Web databases for . Drosophila. annotation. UCSC Genome Browser. 2. n-gram language model. 3. classifier. Studying Humour Features - Bolla, Whelan. Guidelines. define tags and describe how they should be applied. Data. 500 reviews of varying length (>7300 sentences). RuSSIR Young Scientist Conference,. 24-28| 2015| St. Petersburg, Russia. Arshad Khan. School of Electronics & Computer Science,. University of Southampton, UK. Overview. Searching in online repositories of multidisciplinary research data is becoming a challenge due to the volume and types of data being published every year. Thesis Proposal. Tao Huang. taohuang@cs.indiana.edu. Outline. Introduction. Motivation. Related System Survey. Research Issues. Milestones. Contributions. Introduction. Annotation Definitions. A commentary on an object that: (Cousins et al. 2000). Figure 8-1. The Cell Cycle Figure 8-2. Metaphase Chromosome 1. A tissue culture is grown from a cell sample (biopsy). White blood cells, bone 2. The tissue cultur �� �� . Phylogenetic relationships and estimated divergence times of major lineages in the genus Drosophila. Taxa in bold are pr 73 T. R. Strecker, J. R. Merriam and J. A. LengyelH. PARRY D M & GOULD-SOMERO M (1972)Segmenta aneuploid an th geneti gros structuro th Drosophila genome Genetics 71 157-184LINDSLEY D & ZIMM G (1985) Benefit #1 of annotation: . helps you to stay . awake. We all know that sometimes the reading selections can be a tad bit boring right…….. Annotating the text keeps your . brain. . working. . and it keeps you . Tool. (. TART). Outline. Pragmatics & Corpora. Speech/Dialogue-Act Annotation. The DART Approach. From DART to . TART. Observations & Issues. Intended Features. Potential Applications. Pragmatics & Corpora. Heredity. Mutations. Experiments. General Characteristics. 100. 100. 100. 100. 100. 200. 200. 200. 200. 200. 300. 300. 300. 300. 300. 400. 400. 400. 400. 400. 500. 500. 500. 500. 500. Developmental Stages for .