a Tool for Online Annotation and Curation Dorrie Main Taein Lee Ping Zheng Sook Jung Stephen P Ficklin Jodi Humann Jill Wegrzyn and David Neale What is GenSAS It is a webbased ID: 1036167
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1. GenSAS: Genome Sequence Annotation Server, a Tool for Online Annotation and CurationDorrie Main, Taein Lee, Ping Zheng, Sook Jung, Stephen P. Ficklin, Jodi Humann, Jill Wegrzyn and David Neale
2. What is GenSAS?It is a web-based Genome Sequence Annotation Server A one-stop website with a single graphical interface for running multiple structural and functional annotation tools Enables the visualization and manual curation of genome sequences
3. Easy sequence input and task creationUser accounts allow for easy access to DNA sequences, tasks, and resultsMultiple annotation tools are available in GenSAS
4. Sequences can be pasted or uploadedSequences are saved in the user associated database and selected for analysisA customized task can be created by selecting from the list of toolsCustomize the settings for each tool
5. Parameter windows allow user to adjust settings and use custom databases for each tool
6. Tasks are given custom names and added added to the task queueMultiple tasks can be addedUsers are sent email notifications upon task execution and completion
7. Graphical display of results for editing and manual curationZoom in and outNavigate by sliding the sequence or by positionSee the task settings and toolsCreate a custom layer from data or import a layer of dataName of analysisSave the layer data and filter the results
8. Zoom to see the sequenceAdd elements from other layers to custom layer Save the custom layer in gff3 or Chado database format
9. Further Development of GenSASAdd the ability to assign tasks to multiple sequences at once and run the same tool with different settings in the same taskAdd more analysis tools and protein and transcript information to layer data Enable users to add sub-accounts for group editing of annotationsImplement transfer of data to a Chado database and full integration with TripalDevelop a virtual machine so users can install GenSAS as a stand-alone program
10. Funding provided by