PPT-Evidence for lineage-specific DNA methylation patterns in the Pacific oyster

Claire Olson Steven Roberts University of Washington School of Aquatic and Fishery Sciences PCSGA Vancouver WA September 2014 Outline Background epigenetics and DNA methylation Results characterizing DNA methylation and examining degree of heritability. of Possible Sites for . Two Aquaculture . Species in the San . Juan Island Area”. . Meadowdale. Middle School. Spring, 2014. Ryan Kennedy, Raina Shaw, . Aryella. . Barribeau. , Shana Prine, Ethan Sargent, Jocelyn Needham. epigenome with integrative “omics” data analysis.  . Hehuang. “David” . Xie. Sept, 2014. Presentation Outline. Introduction to Epigenetic codes. Genome-wide Hairpin Bisulfite Sequencing. Application on . Taylor Shellfish Farms. Shelton, Washington. Ocean Acidification: . What’s already happening with Shellfish in the Pacific Northwest. July 13, 2008. Kenneth Weiss. Initial seed failures attributed to naturally occurring bacteria, . The rise and fall of biodiversity. Four major . mass extinctions . of marine organisms:. End of Silurian Devonian, Permian, and Cretaceous). Rise in diversity during Cambrian, Silurian, Cretaceous, and Paleogene. eb site Animal Genetics January 2000; 31(1) : 71-72 http://dx.doi.org/10.1111/j.1365-2052.2000.579-5.x OYSTER LIBRARY PACIFIC The Pacic Oyster can be characterised by its fresh, clean and salty  avour – just like being rolled in the surf. Typically, it is large with a spiky shell and clean whit epigenome with integrative “omics” data analysis.  . Hehuang. “David” . Xie. Sept, 2014. Presentation Outline. Introduction to Epigenetic codes. Genome-wide Hairpin Bisulfite Sequencing. Application on . 29. Claim – an assertion about a fact, value , or policy- the conclusion you want your audience to accept.. Evidence – material to support or back up your claim. Sufficient. True or probable. Relevant. Ivana de la Serna. Block Health Science 388. 383-4111. ivana.delaserna@utoledo.edu. Outline. 1. . Epigenetics. -definition and overview. 2. DNA methylation/. hydroxymethylation. 3. . Histone. modifications. Detection Methods. Daniel . Goan. Anna Tseng. Joanna . Tychowski. Feb 2, 2012. MSP. Overview. DNA Digestion Based. COBRA. Real-time MSP. MethyLight. Bisulfite Sequencing. Pyrosequencing. MassARRAY. Southern-blot hybridization. by Dr. . Sawsan. . Saijd. . 1-Post replication events. 2- DNA repair and proofreading activity . While DNA replication errors are rare, they must be corrected by various DNA repair pathways.. . Post. Fade Gong & Nam Nguyen. Introduction. DNA . methylation. in mammals occurs at . CpG. sites, where it serves many functions:. Self vs. non-self identification (such as in viral/bacterial infection). Nadia Khan, Rick Smith, . and Anna . Kuperman. Epigenetics 2012. Introduction. Most Genome Wide Approaches were adapted from technologies originally developed for detecting methylation at the level of a single gene. Michael Savarese AswaniK Volety S Gregory TolleyFlorida Gulf Coast UniversityManagement Restoration of Southwest Florida146s Estuaries149Importance of estuaries149Effects of water management149Need