PPT-What is Microarrays Lecture 1

MBI401High throughput Data analysis Mamta Sagar Department of Bioinformatics UIETIBSBT CSJM University Kanpur 1 INTRODUCTION Functional genomics involves the analysis of large datasets of information derived from various biological experiments One such type of largescale experiment involves monitoring the expression levels of thousands of genes simultaneously under a particular condition. 22x1 lecture 14x1 lecture 14UIC UIC BioSBioS 101 Nyberg101 NybergReading AssignmentReading Assignment Chapter 12, study the figures and Chapter 12, study the figures and understand the color coding.un Intro to IT. . COSC1078 Introduction to Information Technology. . Lecture 22. Internet Security. James Harland. james.harland@rmit.edu.au. Lecture 20: Internet. Intro to IT. . Introduction to IT. Slide . 1. <p> Sample <b>bold</b> display</p>. P. B. #text. #text. nextSibling. prevSibling. nextSibling. prevSibling. firstChild. lastChild. parentNode. parentNode. parentNode. Cancer Institute, Bethesda, Maryland, USA5. and . transcriptomics. Daniel Hurley. What are we going to talk about?. Understanding the core principles and ‘root hypothesis’ of . transcriptomics. Choosing between different . technologies. How to design an experiment. Assembly Language and . Arduino. Behind the C code (or sketch). C provides a somewhat human-readable interface. but it gets . compiled. into machine instruction set. ultimately just binary (or hex) instructions loaded into the . Slide . 1. <. p>Sample . <b>bold</b> display</p>. P. B. #text. #text. nextSibling. prevSibling. nextSibling. prevSibling. firstChild. lastChild. parentNode. parentNode. parentNode. 1. Intelligent Systems (AI-2). Computer Science . cpsc422. , Lecture . 10. Sep, 29. , 2017. CPSC 422, Lecture 10. 2. Lecture Overview. Finish Reinforcement learning. Exploration vs. Exploitation. On-policy Learning (SARSA). Chapter 5: Investigating DNA. Major Topics. 5.1 DNA Isolation,  Sequencing, and Synthesis. 5.2 Bioinformatics. 5.3 Cloning and Recombinant Expression. 5.4 Microarrays. 5.5 In Situ Hybridization. Foundations of Biochemistry. MICRO ARRAY (BIOCHIPS). A . semiconductor . device. It . is used to detect the DNA makeup of a human cell. .. M. icro . arrays contain millions of DNA strands designed to . pair . with their other half as the liquefied human cells are poured over . analysis - outliers. V2: batch effects. V3: data imputation. What . is measured by microarrays?. Microarray normalization. Differential gene expression (DE) analysis based on microarray data. Detection of outliers. Corresponding authorHaben Fesseha, MVSc, DVM Assistant Professor, Department of Veterinary Surgery and Diagnostic Imaging, School of Veterinary Medicine, Wolaita Sodo University, P. O. Box 138, Wolait Barbara Radovani. Genomics. . Master . of. Advanced . genetics. , UAB. Transcriptome. . Source. : https://www.genome.gov/13014330/transcriptome-fact-sheet/. The transcriptome, the entire repertoire of transcripts in. Ali S. Hadi and . Rida. Moustafa. ahadi@aucegypt.edu. ali-hadi@cornell.edu. www.aucegypt.edu/faculty/hadi. Outline of the Talk. Introduction. 2. Types of . Centering and/or Scaling. . Effects of Centering and/or Scaling.