PPT-Data Analysis Group Introduction to NGS

2 nd August 2019 Sequencing history Current sequencing approaches File formats Quality assessment Read trimming DAG workflows The Sequence Read Archive Outline Descriptive text Example commands black monospaced text . Tim Morris (Durham University). a. nd. The CANARY team. CANARY. Contents. Tomography in Adaptive Optics. Multiple Object Adaptive Optics. CANARY Status and Results. Impact on future AO systems. Adaptive optics. Background. Gerald L Mader. 2 . , Andria L Bilich. 1. , Charles Geoghegan. 3. 1. National Geodetic Survey, . NOAA/NOS, Boulder CO; corresponding author: . andria.bilich@noaa.gov. 1. National Geodetic Survey, NOAA/NOS, Silver Spring, MD. of the “standard”. Bob Milius, PhD. Bioinformatics Research. NMDP. How to implement the MIBBI?. The . MIBBI. . is set of. guiding principles &. best practices. By itself,. It is not a specification that a programmer can implement. Jenny . Wu. Outline. Goals : Practical guide to NGS data processing. Bioinformatics in NGS data analysis. Basics: terminology, data formats, general workflow etc.. Data Analysis Pipeline. Sequence QC and preprocessing. Jenny Wu. UCI Genomics High Throughput Facility. Outline. Goals : Practical guide to NGS data processing. Bioinformatics in NGS data analysis. Basics: terminology, data file formats, general workflow . Eric T. Weimer, Ph.D., D(ABMLI). Assistant Professor, Pathology and Laboratory Medicine. Associate Director, Clinical Flow Cytometry, HLA, and Immunology . Laboratories. CONFLICT OF . INTEREST. I . have financial relationship(s) with: . ). . Institute. of . Hematology. . and . Medical. . Oncology. . “L. e A. Seragnoli” . Bologna . Italy. Giovanni Martinelli. as EHA representative . ECCO-ESMO-ESTRO Congress. Amsterdam . 29th September. by. Dru. Smith . NSRS Modernization Manager. David Zenk. Northern Plains Regional Advisor. April 25, 2107. NGS Geospatial Summit. 1. Summary of Intent. The overall message is this:  ". Bluebooking. Vladimir Teif. BS222 – Genome Science Lecture 8. Module structure. Genomes, sequencing projects and genomic databases (VT) (Oct 9, 2018). Sequencing technologies (VT) (Oct 11, 2018). Genome architecture I: protein coding genes (VT) (Oct 16, 2018). Biological Chemistry 3. DNA sequencing. Sequencing. 1) DNA sequencing: . Maxam. -Gilbert method. http://. en.wikipedia.org/wiki/Maxam%E2%80%93Gilbert_sequencing. 2) DNA sequencing: Sanger method. http://www.bio.davidson.edu/Courses/Bio111/seq.html. Vladimir Teif. BS312 – Genome Bioinformatics. Lecture 5. Next generation sequencing analysis. https://micro.magnet.fsu.edu/cells/nucleus/images/chromatinstructurefigure1.jpg. Chromatin basics -- reminder. -- A Whirlwind tour. Presented by Daniel Winester, Geodesist, NGS Gravimetry Representative to the Geophysics Committee of U.S. National Section of PAIGH since 2002. In the past few decades NGS’ gravity work has concentrated on. Sequencing. . Paolo Aretini . Senior . Researcher. Fondazione Pisana per la Scienza. School on . Scientific. Data Analysis,. 25-28 . November. 2019. Scuola Normale Superiore . Outline. Introduction. in the Era of Precision Medicine. JSCO 50. th. Annual Meeting. Yokohama, Japan. October 27, 2012. Mark E. Sobel MD, PhD. Executive Officer. American Society for Investigative Pathology. mesobel@asip.org.