PPT-NGS applications and data analysis

Vladimir Teif Intro to NGS analysis Proficio course 2020 NGS techniques vs NGS applications NGS techniques how to sequence DNA or RNA covered in lecture 1 funny recap in this video. National Geodetic Survey. Andria . Bilich. & Gerald . Mader. Geosciences Research Division. National Geodetic Survey. The . Antcal. Team. Steven . Breidenbach. Hong Chen. Kendall . Fancher. Charles . Tim Morris (Durham University). a. nd. The CANARY team. CANARY. Contents. Tomography in Adaptive Optics. Multiple Object Adaptive Optics. CANARY Status and Results. Impact on future AO systems. Adaptive optics. MAY 11, 2010. SILVER SPRING, MARYLAND. PROBLEMS AND SOLUTIONS DURING THE NAD 83 & . NAVD . 88:. LOOKING BACK. JOHN D. BOSSLER. REAR ADMIRAL NOAA (RET.),. PROFESSOR EMERITUS, OHIO STATE UNIVERSITY. Jenny . Wu. Outline. Goals : Practical guide to NGS data processing. Bioinformatics in NGS data analysis. Basics: terminology, data formats, general workflow etc.. Data Analysis Pipeline. Sequence QC and preprocessing. Jenny Wu. UCI Genomics High Throughput Facility. Outline. Goals : Practical guide to NGS data processing. Bioinformatics in NGS data analysis. Basics: terminology, data file formats, general workflow . of the “standard”. Bob Milius, PhD. Bioinformatics Research. NMDP. How to implement the MIBBI?. The . MIBBI. . is set of. guiding principles &. best practices. By itself,. It is not a specification that a programmer can implement. ). . Institute. of . Hematology. . and . Medical. . Oncology. . “L. e A. Seragnoli” . Bologna . Italy. Giovanni Martinelli. as EHA representative . ECCO-ESMO-ESTRO Congress. Amsterdam . 29th September. Biological Chemistry 3. DNA sequencing. Sequencing. 1) DNA sequencing: . Maxam. -Gilbert method. http://. en.wikipedia.org/wiki/Maxam%E2%80%93Gilbert_sequencing. 2) DNA sequencing: Sanger method. http://www.bio.davidson.edu/Courses/Bio111/seq.html. Vladimir Teif. BS312 – Genome Bioinformatics. Lecture 5. Next generation sequencing analysis. https://micro.magnet.fsu.edu/cells/nucleus/images/chromatinstructurefigure1.jpg. Chromatin basics -- reminder. Patrice Bilesimo | June 2019 | www.covaris.com. Adaptive Focused Acoustics® (AFA®). The Technology. The Origin. Extracorporeal Shockwave Lithotripsy (ESWL) . Apply non-contact acoustic properties to break down kidney and gall stones . 2. nd. August 2019. Sequencing history. Current sequencing approaches. File formats. Quality assessment. Read trimming. DAG workflows. The Sequence Read Archive. Outline. Descriptive text. Example commands – black monospaced text: . Vojtěch Bystrý. 29. . October. 2018. Goals of the presentation. O. verview. of NGS bioinformatics . NGS . bioinformatics < Sequence analysis < Bioinformatics. W. hat to think about when you . Alireza. . Hadj. . Khodabakhshi. Research Investigator. Why is the NGS data processing a big challenge?. Computation cannot keep up with the Biology.. Source: illumina.com. $1000 human . gnome. - 50 whole genome per day. in the Era of Precision Medicine. JSCO 50. th. Annual Meeting. Yokohama, Japan. October 27, 2012. Mark E. Sobel MD, PhD. Executive Officer. American Society for Investigative Pathology. mesobel@asip.org.