PPT-SEA-PHAGES Bioinformatics Workshop Overview

HHMI Logistics Name badges must be worn at all times Restrooms No roaming through the building Questions Ask us Refreshments keep to the schedule Technology Live Streaming The microphones. Mark . Bergland. and Karen . Klyczek. University of Wisconsin-River Falls. . ACUBE Annual Meeting, Lakeland College, . 2012. Case It! Project. URL for . Case It! Home Page:. http. ://caseit.uwrf.edu. . . Prepare phage for testing. *Create high titer lysate via flooding method.. *Isolate phage DNA and replicate using PCR.. *Send off isolated phage to HHMI facility for . Dan Gilchrist. National Human Genome Research Institute. October 18, 2016. The ENCODE Project. 3D Data Access Through the ENCODE Portal. The ENCODE Encyclopedia. Tools for Investigating Genetic Variants. Provided by WV-INBRE. Mary E. Davis, Ph.D.. Bioinformatics Core Director. Outline. Overview of WV-INBRE. Technology supported. Agilent microarray. Illumina. HiSeq1000 (Next Generation Sequencing). Bioinformatics analysis resources supported. High-throughput Data Analysis. Literature Study. Data Mining . Functional Genomics Analysis. Vector NTI Advance®. Software. License type. License number. 2008. 2009. 2010. 2011. 2012. 2013. 2014. Galaxy. Monique L. Mills. , Judd Bragg,  Asri Bruce, Ari Dehn, Morgan Hefner, Dylan Katon, Dustin McHugh, Payton Petersen, Franck Zeba, . Gerard P. Zegers, Shallee T. Page.. University of Maine at Machias, Machias, ME 04655. th. Dec . 2016, CERTH-INAB . EGI Federated Cloud. and . Chipster. Platform for Bioinformatics Studies. Dr. Yin . Chen (. EGI Foundation). , . yin.chen@. egi.eu. . Dr. . Fotis. . Psomopoulos. (AUTH. Jan - June 2015. Consulting researchers on bioinformatics tools, data analysis, data management, . and interpretation of experimental . data.. Analyzing of high. -throughput . sequencing data and conducting . Section 1: Introduction and biological databases.. Section 2: Sequence alignment.. Section 3: Gene and promoter prediction.. Section 4: Molecular phylogenetics.. Section 5: Structural Bioinformatics. Dr. Ronald Moura. ronaldmoura1989@gmail.com. https://www.linkedin.com/in/ronald-moura-660017178. /. Gordon Moore . “The . number of transistors in a dense integrated circuit doubles about every two . Lecture 1 – Introduction . to . Bioinformatics. Petrus Tang, Ph.D. (. 鄧致剛. ). Graduate Institute of Basic Medical Sciences. and. Bioinformatics Center, Chang Gung University. .. petang@mail.cgu.edu.tw. 24. ) structure for Osiris gp52 superimposed using Cn3D (. 32. ) on the phage P22 c2 repressor protein reveals high structural homology, with an altered C-terminal tail. Osiris gp52 is similar. . to P22’s c2 repressor near the N-terminus that is the DNA binding domain as predicted by . , . B.Sc. Biotech Teaching Assistant. Omdurman Islamic University. Bioinformatics Topics. Informatics. Biology. Operating Systems. Windows. , . Macintosh . both offer an intuitive . GUI . … familiarity . There exist different levels of computational methods for . describing metabolic networks:. - stoichiometry/kinetics of classical biochemical . pathways. (glycolysis, TCA cycle, .... - stoichiometric modelling (.