PPT-Overview of Gene Clustering and Algorithmic Methodologies
Author : trish-goza | Published Date : 2016-04-26
Beth Benas Rizwan Habib Alexander Lowitt Piyush Malve Contents What is Gene Clustering Two or more genes that code for the same or similar products Two different
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Overview of Gene Clustering and Algorithmic Methodologies: Transcript
Beth Benas Rizwan Habib Alexander Lowitt Piyush Malve Contents What is Gene Clustering Two or more genes that code for the same or similar products Two different processes for duplication of original genes via . Hierarchical Clustering . Produces a set of . nested clusters . organized as a hierarchical tree. Can be visualized as a . dendrogram. A tree-like diagram that records the sequences of merges or splits. Ensemble Clustering. unlabeled . data. ……. F. inal . partition. clustering algorithm 1. combine. clustering algorithm . N. ……. clustering algorithm 2. Combine multiple partitions of . given. data . and Physical Interaction . Datasets. Manikandan Narayanan, Adrian Vetta, Eric E. Schadt, Jun Zhu. PLoS Computational Biology 2010. Presented by: Tal Saiag. Seminar in Algorithmic Challenges in Analyzing Big Data* in Biology and . CSC 575. Intelligent Information Retrieval. Intelligent Information Retrieval. 2. Clustering Techniques and IR. Today. Clustering Problem and Applications. Clustering Methodologies and Techniques. Applications of Clustering in IR. Lecture outline. Distance/Similarity between data objects. Data objects as geometric data points. Clustering problems and algorithms . K-means. K-median. K-center. What is clustering?. A . grouping. of data objects such that the objects . Rare . Event. Analysis with Multiple Failure Region Coverage. Wei Wu. 1. , Srinivas Bodapati. 2. , Lei He. 1,3. 1 Electrical Engineering Department, UCLA. 2 Intel Corporation. 3 . State . Key Laboratory of ASIC and Systems, . Cynthia Sung, Dan Feldman, Daniela . Rus. October 8, 2012. Trajectory Clustering. 1. Background. Noise. Sampling frequency. Inaccurate control. SLAM . [. Ranganathan. and . Dellaert. , 2011; Cummins and Newman, 2009; . EECT 7327 . Fall 2014. Algorithmic . (Cyclic) ADC. Algorithmic (Cyclic) ADC. – . 2. –. Data Converters Algorithmic ADC Professor Y. Chiu. EECT 7327 . Fall 2014. Input is sampled first, then circulates in the loop for N clock cycles. to . LC-MS Data Analysis. . October 7 2013. . IEEE . International Conference on Big Data 2013 (IEEE . BigData. 2013. ). Santa Clara CA. Geoffrey Fox, D. R. Mani, . Saumyadipta. . Pyne. gcf@indiana.edu. Unsupervised . learning. Seeks to organize data . into . “reasonable” . groups. Often based . on some similarity (or distance) measure defined over data . elements. Quantitative characterization may include. Holography. Or . How I learned to stop worrying and love the analytic gradient. . Wesley E. Farriss and James R. . Fienup. Clrc. . 2018. Okinawa, Japan. Clustering, Dimensionality Reduction and Instance Based Learning Geoff Hulten Supervised vs Unsupervised Supervised Training samples contain labels Goal: learn All algorithms we’ve explored: Logistic regression 1. Mark Stamp. K-Means for Malware Classification. Clustering Applications. 2. Chinmayee. . Annachhatre. Mark Stamp. Quest for the Holy . Grail. Holy Grail of malware research is to detect previously unseen malware. Log. 2. transformation. Row centering and normalization. Filtering. Log. 2. Transformation. Log. 2. -transformation makes sure that the noise is independent of the mean and similar differences have the same meaning along the dynamic range of the values..
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