PPT-Genome architecture and evolution

Key considerations Genes Chromosomes C value paradox Gene regulation Epigenetics Transposable elements DNA mRNAProtein Plant Estimated genes Arabidposis. The Plot. Deepak . Purushotham. Hamid Reza . Hassanzadeh. Haozheng. . Tian. Juliette . Zerick. Lavanya. . Rishishwar. Piyush. . Ranjan. Lu Wang. The Outline. The Need & The Requirement. The Options. Sita Ping. Department of Zoology. Mentor: Dr. Dee Denver. HHMI Summer 2010. Background: Mitochondria. organelle in eukaryotic cells that is responsible for energy production. Electron transport chain, located in the inner membrane of Mitochondria produces usable energy and in doing so gives off reactive oxygen species (ROS). Active Roles in Evolution of . Immunity and Pregnancy . Retroviruses 2015. Chicago, June 8, 2015. James A. Shapiro. University of . Chicago. jsha@uchicago.edu. www.shapiro.bsd.uchicago.edu. . Evolutionary time: Genome writing . Endosymbionts. February 11, . 2012. Seth Bordenstein. Departments of Biological Sciences &. Pathology, Microbiology, and Immunology. s.bordenstein@vanderbilt.edu. Symbiosis: . “The living together of dissimilar organisms” de . Chapter 21. You must know. How prokaryotic genomes compare to eukaryotic genomes.. Applications of bioinformatics to medicine, evolution, and health.. The activity and role of transposable elements and retrotransposons in generating genetic diversity.. Key considerations:. Genes . Chromosomes. C value paradox. Gene regulation. Epigenetics. Transposable elements. DNA . ……..……..mRNA……….…….Protein . Plant . Estimated # genes. Arabidposis. Jan Pačes. Institute of Molecular Genetics AS CR. sizes of selected completed genomes. genome. chromosomes. size. genes. Mycoplasma. . genitalium. 0.58 . Mbp. 521. Escherichia coli. 4.6 . Mbp. (5.4. What you need to know:. The major goals of the Human Genome Project.. How . prokaryotic genomes compare to eukaryotic genomes. .. Applications of bioinformatics to medicine, evolution, and health.. The activity and role of transposable elements and . Summary of Research Interests. Gene identification and genome annotation. The evolution of genome-sequence compositional properties. Models of protein evolution. The phylogeny of Bacteria. Measures of differentiation from genomic and . in Development, Evolution and History. Manfred D. Laubichler. Arizona State University. Santa Fe Institute. Marine Biological . Laboratory. Max Planck Institute for the History of Science. John’s Challenge for Future Work:. xxia@uottawa.ca. http://dambe.bio.uottawa.ca. Definitions. Genome: the . entire complement of genetic material carried by an individual. Transcriptome with two definitions:. the . entire set of . transcribable sequences from the genome (operationally all RNA sequences from annotated productive genes in a genome). [22]. The pattern of blocks was assessed to see whether theirarrangement in the ancestral genome prior to duplicationarrangement in the ancestral genome prior to duplicationequally parsimonious series By . Smt. . Gayatri. P. Senior Technical Director. Workshop scheduling. Session 1: Introduction to Enterprise Architecture. Session 2: Exploring various EA Frameworks. Session 3: . IndEA. Framework. . Knowing how many genes determine a phenotype (Mendelian and/or QTL analysis), and where the genes are located (linkage mapping) is a first step in understanding the genetic basis of a phenotype . A second step is determining the sequence of the gene (or genes).